FMO02825.5prime Sequence
1220 bp (1050 high quality bases) assembled on 2008-06-10
> FMO02825.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTGGCGTCAAA
TCCTGTTTATTTTACCCACCCTGATACAGGGGGTCCAGCGCTACGATCAG
AGCCCCCTCGATGCGAGTCCGTATTATCGCAGCGGCGGGGGATTAATGGC
CAGTTCTGGGACCGAACTAGATGGACTGCCACATCACAATCGCTGTGAAC
CCATCACCATATCGATCTGCAAGAATATACCATATAACATGACCATTATG
CCAAATCTTATTGGCCATACCAAGCAGGAGGAGGCGGGTCTGGAGGTCCA
TCAGTTTGCTCCGCTCGTGAAGATCGGCTGCAGTGATGACCTCCAGTTGT
TCCTCTGTTCCCTGTACGTTCCGGTCTGCACAATTTTGGAGCGACCCATT
CCGCCTTGTCGATCTCTGTGCGAATCGGCGCGGGTATGTGAAAAGTTAAT
GAAAACCTACAACTTTAACTGGCCGGAAAATCTGGAGTGCTCCAAATTTC
CCGTCCATGGAGGCGAGGATTTGTGCGTGGCGGAGAATACCACATCATCG
GCCTCCACGGCGGCCACGCCCACAAGGAGTGTGGCTAAGGTCACTACCCG
TAAACACCAGACGGGCGTAGAAAGTCCGCACCGAAACATTGGATTCGTGT
GCCCCGTGCAACTGAAAACGCCTCTGGGAATGGGCTACGAACTAAAAGTT
GGCGGAAAGGATCTGCATGACTGTGGAGCCCCATGTCATGCCATGTTCTT
CCCGGAGAGAGAAAGGACTGTGCTTCGATACTGGGTTGGATCCTGGGCAG
CGGTCTGTGTAGCCAGCTGCTTGTTTACGGTGCTCACCTTCTTGATTGAC
TCGTCGCGTTTTCGCTACCCGGAGAGGGCCATTGTCTTCTTGGGCCGTTT
GCTACTTGGTAGTGGATGTGCCTACGTGGCGGGACTGGGAGCGGGCGACT
CTGTGTCGTGCCGCGACCATTTCCGCCGCCGTCAAACTCGGCGCTGCAGA
TGATGTCCACCATCACCAGGCAACGACAACACGTCTGCACGTTTATCATG
GCACTCTACTCTGCTGCATGCCGCCTTCGCGTGTTGTCGTGTCTAGCATC
GCTGGATTTGGCGCCTGGCTCCAATGGGCACGAGCCATTGAAAACAAGTC
GCACTTATCACTGATGTCTGGGCGGTACGACCTCGACATTCTCCGCTCTG
ACCTGGGCATAATTAAAGGG
FMO02825.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:38:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fz-RC | 3817 | CG17697-RC | 713..1856 | 38..1158 | 4990 | 96.9 | Plus |
| fz-RA | 3817 | CG17697-RA | 713..1856 | 38..1158 | 4990 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:38:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 14275055..14275727 | 38..710 | 3365 | 100 | Plus |
| 3L | 28110227 | 3L | 14311860..14312052 | 829..1017 | 690 | 96.4 | Plus |
| 3L | 28110227 | 3L | 14304895..14305018 | 708..831 | 620 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:38:46 has no hits.
FMO02825.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:01 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:04 Download gff for
FMO02825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz-RB | 713..1748 | 38..1060 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:25:11 Download gff for
FMO02825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fz-RA | 713..1748 | 38..1060 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:25:11 Download gff for
FMO02825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 14275055..14275726 | 38..709 | 100 | -> | Plus |
| 3L | 14304897..14305016 | 710..829 | 100 | -> | Plus |
| 3L | 14311861..14312055 | 830..1019 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:04 Download gff for
FMO02825.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 14268155..14268826 | 38..709 | 100 | -> | Plus |
| arm_3L | 14297997..14298116 | 710..829 | 100 | -> | Plus |
| arm_3L | 14304961..14305155 | 830..1019 | 96 | -> | Plus |
