Clone FMO02829 Report

Search the DGRC for FMO02829

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:28
Well:29
Vector:pMK33-CFH-BD
Associated Gene/TranscriptTom-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02829.5prime Sequence

314 bp (314 high quality bases) assembled on 2008-06-10

> FMO02829.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGTTCATCAC
ACGGGAATACAAGTTTGAGAGCAGCAAGGTGATGGAGCCGAAATCAGATC
AGCACACGATGGCCATGCGGAGTCTGAGGAAACTGGTCAAACCCCTTCTG
CGACTGGTGAAGAAGAAGCAGCTACTCCGGAAGACTCTGGCCGAGATCCA
GAACCAAAATGCAGTCAACGCCTCGCTGGAGGACATGCGCAAAGATCCGG
CGGCCAGTTGCGATAACATGGCCAACGAGGAGCTGGAGCAGCGACTGTAC
ACCGATCTCCGCCA

FMO02829.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:09:00
Subject Length Description Subject Range Query Range Score Percent Strand
Tom-RA 963 CG5185-RA 84..361 37..314 1390 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 14969427..14969704 37..314 1390 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:08:59 has no hits.

FMO02829.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:00 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:13 Download gff for FMO02829.5prime
Subject Subject Range Query Range Percent Splice Strand
Tom-RA 76..360 28..313 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:32 Download gff for FMO02829.5prime
Subject Subject Range Query Range Percent Splice Strand
Tom-RA 76..360 28..313 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:32 Download gff for FMO02829.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 14969419..14969703 28..313 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:13 Download gff for FMO02829.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 14962519..14962803 28..313 98   Plus