FMO02830.5prime Sequence
768 bp (768 high quality bases) assembled on 2008-06-10
> FMO02830.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGACGTTGCCCGA
GTTCTTTGGCTGCACCTTCATCGCCTTCGGACCGCCCTTCGCCTTGTTCG
TCTTCACCATCGCCAATGATCCAGTGCGGATCATCATTCTGATTGCGGCG
GCATTCTTCTGGCTGCTTTCCCTGCTGATCTCTTCCCTGTGGTATGCCCT
GATTCCGCTGAAGGAGTTCCTGGCATTTGGCGTGGTCTTCTCGGTGTGCT
TCCAGGAAGCCTTCCGGTACATCATCTACCGGATACTGCGCAGCACGGAA
CAGGGATTGCACGCCGTGGCGGAGGACACGCGAGTGACGGACAACAAGCA
CATCCTGGCCTATGTCTCCGGCTTGGGATTCGGCATTATATCCGGGATGT
TTGCACTGGTCAATGTGCTGGCTGATATGAGTGGTCCCGGCACCATGGGC
TTGAAGGGCGGAACTGAGCTATTCTTCGTCACCTCGGCTGCCCAGGCGTT
GTCGATTATCCTGCTGCACACCTTCTGGAGCGTTATTTTCTTCAACGCAT
TCGACACAAACAACTATATCCACATAGGCTATGTGGTTTTCAGCCACCTG
TTCGTCTCCCTGATAACTCTGCTCAATGCCAATGAGCTTTACACGACCAC
TCTGCTGATAAACTACTTGGTCACCATACTTACGGGAGTCCTGGCCTTCC
GGGTGGCTGGAGGAACATCTCGCAGTTTCAGAAAATTCATAACATGCCAG
GCAAGCTTTCTAGACCAT
FMO02830.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aph-1-RB | 990 | CG2855-RB | 83..796 | 37..750 | 3555 | 99.9 | Plus |
| aph-1-RA | 863 | CG2855-RA | 83..796 | 37..750 | 3555 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2766315..2766707 | 37..429 | 1950 | 99.7 | Plus |
| 2L | 23513712 | 2L | 2766766..2767087 | 429..750 | 1610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:18 has no hits.
FMO02830.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:03 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:58:59 Download gff for
FMO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aph-1-RA | 76..799 | 30..754 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:16:59 Download gff for
FMO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| aph-1-RA | 76..799 | 30..754 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:16:59 Download gff for
FMO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2766308..2766707 | 30..429 | 99 | -> | Plus |
| 2L | 2766767..2767090 | 430..754 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:58:59 Download gff for
FMO02830.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2766308..2766707 | 30..429 | 99 | -> | Plus |
| arm_2L | 2766767..2767090 | 430..754 | 99 | | Plus |
