FMO02843.5prime Sequence
1227 bp (1005 high quality bases) assembled on 2008-06-10
> FMO02843.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGTCGAACGGC
TTCTTTGTTTCTCGTTTAAAACAACCAAATATTGCTCCAACACTTCCAGT
ACTTTCTCCACATTCACCAATGAATGCTAATATACATATAAATAGCCAGC
ATACCCAACTTTCCGGTCGATATCTAAATAACAAAGTGTCCCAACAAATC
GACACTGAAAGTATAAAAAGAGTGGCATCTAACCGATCTCTAAAGGACAG
TCAAAACGTCTTATCCATTTCATCAACTCTAATATGCAACTGCGAGAAGG
CCCAAAAATCGAATGGCTCAGAAGCGGAAGCAAACGAAGAAATCAAAATT
AAACTGAGCTCAGATACTGGTAACAAATCTACCATTAGTAAATTAAAAGA
CCCGAAACTCTCTTCAGCGTCGGAAAAAAACGCATTAGATAATTCAACCG
AGGGTTGTTTGCAATTGAAAAGTGTAATTGGAAAGGAGCAAAAATCGCTG
TCTCCGAGACTGACGTTACACAAGAGTGGGTTTCAACAGGCCATCATAAT
TTCCGACGACAGTGAGAACACGAAGTCTTCGCGATTAGGTACCCAAACAG
CAAGGCAGCTCTCCAGTAATTCAGACAATCAATTTTATCGACAGCTTACC
CATAAGATTAGCAAATCGGAGCAAACTTCCCCAAACAACTTGGAGCTAGA
CAAAGCTAACTTTCTCTACGATACGAACAATAGGAGTACGGGCTGTTTGG
TGTATCCTTCGGATCCATGGATAAAGAACTCGCATATTAAGAACAGCTTG
TCCCCCAAAACGGAAAAGTATTCAAACACCATGCATCACAATATCGATCC
GTGGGTCAAGAGACAAACAGATGCTGCTGTGGAAATCTCACGGCTTCCCA
AGAAAAATTTCTACCGCGAAAAATCCCTTTCTTCATAAACAGTAAACTAA
TTTCGACAGAACTGAGAATCAAAGTGTGCAAAGCCGCAGTTGAGCATTCG
AATACGGGCTGACGATGATCAAGTATTTTTAAATGAGCCAGATGCCTTTT
GCTCAATTCTCCTCGCATATCGCCACCCGTCGCATAAAATCTGTCCTTCG
ACAGCATTCTGACGAATCTGGATGCCACATTTCATCCAGGTCGCTAGTTT
TTAACGACAGGCAGCATCCGTCCATTGCCGAACGGTCGAAATCTGTTAAC
AAACAATAATTTGCGTGGTCCAAGTTC
FMO02843.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:19:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33096-RG | 3581 | CG33096-RG | 1561..2693 | 32..1152 | 5020 | 97 | Plus |
| CG33096-RF | 3465 | CG33096-RF | 1445..2577 | 32..1152 | 5020 | 97 | Plus |
| CG33095-RB | 3581 | CG33095-RB | 1561..2693 | 32..1152 | 5020 | 97 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:19:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25100126..25101196 | 32..1093 | 4790 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:19:32 has no hits.
FMO02843.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:00 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:18:04 Download gff for
FMO02843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33095-RA | 129..1205 | 26..1093 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:54:46 Download gff for
FMO02843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33095-RB | 1555..2631 | 26..1093 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:54:46 Download gff for
FMO02843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25100120..25101196 | 26..1093 | 98 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:18:04 Download gff for
FMO02843.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20925842..20926918 | 26..1093 | 98 | == | Plus |
