FMO02844.5prime Sequence
1209 bp (1065 high quality bases) assembled on 2008-06-10
> FMO02844.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCAGCGATAT
TCCACCTTCAGCCATCCGTATTTGGATGGACAAGCTGAAAAAGGGCGTTG
GGCAGCCGGCGACAGTCCTAGAGCGTTCCCTGCTCAATTTAATGAGTGCA
GAAGCAGCCAGTTTATCGGTGAAAAATGCCACGGAGCGAGGCATACTGGT
GGCCAGAGCAGGCGGCGGACGGTCCAAGCGTCTGGCCCTCGCCTTTTGTC
AAAAAGTAAGCCGGCTGCCCAGCTCACCAATTGATCCGTTCTGCTTCGAG
TGCCATTTGCCCGGAGCCGTTAAGAAATGCATATCCTGCCATCGCTCCTT
CCACGAGAATTGCCAGCGACAGGACCCGGAGAAGCCCAATTATTCAGTGC
CCTCGGACAAGGGCCAACCTTACCAGTTTCCCGTCAACGAATTGGACAAT
CAGCCCCTGAATAACACTCAGAACTTGGAGACTCCCCAAACGCCAACGCC
CCTGCTCGATCATAATAGCAACATCAATCAGACTTTGCTAGCCACTACGG
ATTTCCTGAAGCACGAGAACATCGAGTGGGACGACGACGTCTTCTTTGTG
TGCGAACAAAAGGGCGCGCGCCAGCGAAAGCTGCCCAGGATCAAGGACGA
ACTACAAAGCAGTTTGGATAGCGATGAGGGAAGCGATCTGGAGCGCTGCA
CCCACTGCCGTTTGCTCGCCCTGGCCGCTCTCCACAACCCACCGCAACTC
GACAAGCAAGAGCTGGGCTGCCTATTGAAGTACTCCTGGGACCAGCATCA
CTCCTGGATCTCCATGGATGTGGCCAAGTACATGGCCAAGCATTGGAACG
AACGCGACAAGGCGCTGGTTAAGCGGCTACTCTTCAAGACAAAGATTTTG
GGTCTGGGCGACATCGAGCGCACATAGCGGCGGCGAAGTATACGTACCTA
CAGAATTCCTAATGGATCTGCTCGATCTGCAGCACAACATGGCCGTGTTC
TTTGGGCAAAGAGCGTTGAGTACAATGCCACCAGTGCTGATGAAGATGTG
ACGCACGACATTCCGCGAATCCGTCGTGCCGACTGCCTATAGTATTCCCA
CGAGCAGCTGTCGATTCCTGGTTCGCCAAGCATGTCTTCACGTCGGTGGG
ATTTGCCCAGCGGTGGCTCCCCACGTGGCCGTGCAAGGGATATAGAGCTC
TCAAGCGGC
FMO02844.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:02:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8569-RA | 2334 | CG8569-RA | 68..1185 | 37..1140 | 5125 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:02:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12519410..12520344 | 149..1077 | 4320 | 98.7 | Plus |
| 2R | 25286936 | 2R | 12519233..12519347 | 37..151 | 575 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:02:09 has no hits.
FMO02844.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-06-10 14:37:49 Download gff for
FMO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-RA | 82..1117 | 34..1063 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:59:56 Download gff for
FMO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-RA | 65..1100 | 34..1063 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:20 Download gff for
FMO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8569-RA | 65..1100 | 34..1063 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:20 Download gff for
FMO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12519230..12519347 | 34..151 | 99 | -> | Plus |
| 2R | 12519413..12520330 | 152..1063 | 99 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:59:56 Download gff for
FMO02844.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8406735..8406852 | 34..151 | 99 | -> | Plus |
| arm_2R | 8406918..8407835 | 152..1063 | 99 | == | Plus |
