FMO02846.5prime Sequence
1236 bp (1040 high quality bases) assembled on 2008-06-10
> FMO02846.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAAGAGGAGCAC
CACCCAAATTCTGACCAGGTTGAGGGAGCTAATGCTCCGCGCCCAGGTGG
GCGACTCCTGCGGCATATCGGCATACATTGTGCCCTCGGACGACGCCCAT
CAGTCGGAGTACCAGTGCCAGCATGACGAGCGACGCTCCTTTGTGAGTGG
TTTCGATGGATCCGCTGGCACGGCGGTGATAACGACGGAGACCGCACTGC
TGTGGACCGACGGTCGTTACTATCAGCAGGCGGAGAAGCAGCTGGACTCC
AATTGGGTTCTAATGCGGGATGGTCTGAGCGCCACCCCGTCGATTGGCGC
CTGGCTGGCGAAGAATCTGCCCAAGGGCAGCTTTGTGGGCGTGGATCCTC
GCCTGTTGTCGTTCCGCGTATGGAAACCCATCGAAACGGAACTAAGCTCC
GCGGAATGCCAGCTGGTGCCCATCGAAGGCAACCTCATCGACGAGGTCTG
GGGTGAGGATCAGCCACCGCAAACCTCAAACAAGATTATAACCCTGAAAC
TAGAACATTCTGGCGTAACTATCGCCAAAAAATGGGACGTGGTGCGCCAG
CAGTTGAAGGAGAAGAATGCTGATGCCCTGGTGGTCAGTGCTCTCGATGA
AATCGCTTGGTTCTTGAACCTACGCGGCTCGGACATTGACTTCAACCCCG
TCTTCTTCTCCTACTTGATTGTGACCAACGATGAACTACTGCTCTTTGTG
GACTCTGGCAAATTGCCCACTGATTTTGTGCAGCATCAAAAGGAGAACAA
TGTGCAGATAAGCGTTTTGCCTTACGCCTCAATTGGCATTGAAATCAGTA
AGATTGTGTCGACCAGGGAGTCAAAGATCTGGATAGCACCCACCAGCAGC
TACTATCTAACTGCTTTGATACCCAGTCACGTAGAATTCAGAGTAACGCC
GATTTGTGTGCTGAAGCCATTAGACGATGTCGAGATCGCAGCTTCATCAC
AGCCACATCGCGATGGAGTCGCTTTGGTGTCAGTATTTCGCTGCTGAGAT
CAAGTGAATAAGGTGCGAGTCGATGAATGTTCTGTGCCGAATAAACTCGA
GTCTCGTCGACAAAGAATAAGTACATGGACTAGCCTCACACAAATTATGG
TTCGGGAACACACGGCCGTTATTCATATAACCCCACAGAGGAATCCACGA
GAATATTGCCAGAGAATTTTCTGCGGGGGATATCCG
FMO02846.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ApepP-RB | 2190 | CG6291-RB | 262..1433 | 37..1183 | 4975 | 96.5 | Plus |
| ApepP-RA | 2066 | CG6291-RA | 138..1309 | 37..1183 | 4975 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 16909145..16910157 | 1041..37 | 4610 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:32:36 has no hits.
FMO02846.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:02 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:25 Download gff for
FMO02846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ApepP-RA | 134..1261 | 29..1139 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:42 Download gff for
FMO02846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ApepP-RA | 134..1261 | 29..1139 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:42 Download gff for
FMO02846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 16909034..16910161 | 29..1139 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:25 Download gff for
FMO02846.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 16909034..16910161 | 29..1139 | 97 | | Minus |
