FMO02851.5prime Sequence
1205 bp (1021 high quality bases) assembled on 2008-06-10
> FMO02851.5prime
TCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGTCTATTAACCT
GCGCACCGTCTACGCCTTCGCCCGCGAGATGTACCCAAAGACCTCCAAGG
AGACCATCCAATATGGAACAGCTGGCTTTCGCGGCAAGGCTGAGTTCCTG
GACAGCGTGATGTTCCGCATGGGCGTTCTGGCCACCCTGCGTTCCCGGTA
TCGCGGAGGCTCCGTCATCGGTGTGATGATCACGGCATCGCACAATCCGG
AGCCGGACAACGGAGTGAAGCTGGTCGATCCCAAGGGCGAGATGCTGGAG
GCCAGCTGGGAGGCGATAGCCACCGATCTGGTCAACGTCAGCGACCAGGA
GCTGGAGCAGCAGGTGGCCAAGATCATAAAGGACAACAATATCGATGTGA
CGACCAGTTCCCAGGTGTTTGTGGGCATGGACAACAGATACCACAGTCCG
CGGCTGCTGAAAGCGGTGGCCGATGGCGTGATAGCGCTAAAGGGTAACGT
CAAGGAGTACGGCATTGTGACCACACCCATGCTGCACTACTTCGTGGTGG
CGGCGAATACCAAGGAGGCATACGGCAAGCCCACCGAGGAGGGTTACTAC
GACAAGCTGATCAAGGCATTCGAACTGCTGCGCAACGGGCGCCTGGAGAA
CGGCAACTATCGCAATAGCATCATCTACGATGGTGCCAACGGTGTGGGTG
CGCGCAAGATGCTGCAGTTCATCAAGCGCATGAAGGGCACCCTCAACGTG
ACGGTCATTAATCAGGGCATCGGTGTCGGCAAGATCAACGAGGACTGCGG
CGCCGACTACGTGAAGGTGCAGCAAAGTCCGCCGAAATCCATGCCCGAGG
ATGTGAAGCCGTACACGAGATGCGTCAGCGTGGATGGCGATGCCGATCGG
GTGGTGTACTTCTTTACCGACGACAGGTGAGTTCCATCTGCTCGATGGCG
ATCGCATAGGCACCCTAATCGGCCGGCTATCTCATGGTACTGGTCACACA
TCCGAGATTAGCCTACGGCTGGACTGGTGCAACTGCTACGCAATGGTGCA
TCCACGACTACTAGTGACAGCTGAGTTTCCGGTTTCGTGCGTACCCACGG
GCGTGAGCACTGCACACAGCCTGAGTACGACTGGGGTTTACCTCAAGGCA
TGCACGGTACGATTGGTCAGGACATGCTAAGGGGCACGAATGCCAGTGTG
TCCAC
FMO02851.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| nst-RA | 2202 | CG10627-RA | 137..1321 | 37..1194 | 5070 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 12528269..12529248 | 1106..138 | 4250 | 98.2 | Minus |
| 3L | 28110227 | 3L | 12529934..12530035 | 138..37 | 510 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:21 has no hits.
FMO02851.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:00 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:06 Download gff for
FMO02851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nst-RA | 128..1230 | 26..1118 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:32 Download gff for
FMO02851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| nst-RA | 128..1230 | 26..1118 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:32 Download gff for
FMO02851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 12528254..12529248 | 138..1118 | 97 | <- | Minus |
| 3L | 12529935..12530044 | 26..137 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:06 Download gff for
FMO02851.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 12521354..12522348 | 138..1118 | 97 | <- | Minus |
| arm_3L | 12523035..12523144 | 26..137 | 96 | | Minus |
