FMO02862.5prime Sequence
1207 bp (1083 high quality bases) assembled on 2008-06-10
> FMO02862.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGATACCCTGGAT
GCGGGAGAAGTTCAACGAGAAACGGGCCAAGTGGTTGGCGCGTAGCAAGC
GCAGCGGTGGTTCTCCGGCTGACGAAAGCCCTCGGAGCAGCAGTCATAGC
CACAGCCAGCGGACAGACGCCAGCGATGCGGAGAGCCTGAGCGGATCCTC
GTTGAATGTCCACACGGCGGAATCTGAAACGCAGACGGATGGCGGGATAT
CCGCTTCCAATTCGCGGCCCCTTGTGGGCGGGGGCAGTTGCGTCCTAAGG
ACTCCATCGCCCGCTCGCCGACGTCGCATTCACCTTGAGCTACAGCTGCA
GCGACGAGAGGAACGTGCTGAGCATCAGAAGGTGGTGCCACAGGACTCGC
CCACGCCCACTCACCAACAGCAGGCTAATGCGAAATCAGCCCATACAAAT
CGCCCAGGTAGCTCTACTTCTGGCGAGGCAGACGATGCCAGCAGGCCAGG
TGAATCTATCCTGGTGCGGGTAATCTGCCCCAGCTCTCGGGTTCTTATCT
TCAAAACGGACGTTAATAAGCGCCTAAACGAGCTGAAGAGTGAGGTGATT
CTGGAACTGAGCGACGATCCCGACTCCATCCAGCTATTTGCCCCAGATGT
GCGGCATCTTAATCCGCGATACCGTCTCTATCGGGCGGAATACTTCGGCG
GCGAGCTTAACGAGGGCGACACGCTGGCCCAGCTAAAAGTTCGCAACAAT
GAGACTTTCATACTCTCCCCACGACGCAATACTCTGCCGCAGACTGTTTC
ACGGATACGTGAGGTTCCTGGCCCAAATGAGCAGCTGGTGGAGAGCGCCA
CCCGATACGTGCCCGTCAATTGCAACCAGCTGCCCACCATCGATATTAAT
GAAATCTTTCAGCAGTCGATATCCAATACGATGTGCGAAAGTGTGATCTC
TTTGGCTCAGCTTCTGCGGCGGTTATAGGAGCTGGCCCTTATGCTCACGC
TGATAGCTATGCTAAAGCAACGTTTGATCATCGCGAATCAGCAAGCGGAT
ACGCTGCATGCTCGTGACATGGGCTTCAGCGGGAGCTAGCCGCATTTGCT
AAAGCACACATGGCATTTACTCGACCGATGGATGGCCTATACGAACAAAT
AGGAAATTCCAGGACGCGGCATGAAATTGCACAAGTCTATCTCATTCTGC
CCTCTAC
FMO02862.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:11:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| isopeptidase-T-3-RA | 2479 | CG11025-RA | 138..1244 | 37..1126 | 5120 | 98.5 | Plus |
| isopeptidase-T-3-RC | 2491 | CG11025-RC | 138..1256 | 37..1126 | 4990 | 97.4 | Plus |
| isopeptidase-T-3-RB | 1778 | CG11025-RB | 134..845 | 432..1126 | 3145 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:11:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 19671361..19671848 | 432..919 | 2440 | 100 | Plus |
| 2R | 25286936 | 2R | 19670755..19671150 | 37..432 | 1980 | 100 | Plus |
| 2R | 25286936 | 2R | 19671906..19672127 | 921..1126 | 395 | 90.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:11:15 has no hits.
FMO02862.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:01 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:40:43 Download gff for
FMO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| isopeptidase-T-3-RA | 138..1263 | 37..1142 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:56:57 Download gff for
FMO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| isopeptidase-T-3-RA | 138..1263 | 37..1142 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:56:57 Download gff for
FMO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 19670755..19671149 | 37..431 | 100 | -> | Plus |
| 2R | 19671361..19671850 | 432..920 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:40:43 Download gff for
FMO02862.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 15558260..15558654 | 37..431 | 100 | -> | Plus |
| arm_2R | 15558866..15559355 | 432..920 | 99 | -> | Plus |
