FMO02863.5prime Sequence
1225 bp (1031 high quality bases) assembled on 2008-06-10
> FMO02863.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGCCACAGCAACG
GCGCAAGGTGGCCTTTAGCGGCAAGAAGAAGAAGGACCAGATGTTGCAAA
AGCGCAACACAAAAGGTCCCCCAAAGTATCTGAGGAGCACGCAGGAGTCG
TATGAGGACAGCGATGTGCCGGAAACGACCAGGAAACTCATGGAGCAGCC
TTTTGCGCGCGGCGGAAACCGAAACAAGAACGTCAATCGCTATAATTTGC
AATTCTACCAGGAGGGCAAAAAGGAACTGGAGCAAATGAAACAAGAGGGC
TTTAAACCGTTCGAGAAACTCAGTCCCGCTCAGCGGGAAGTGGACGACCG
ATACTTTGCCGGCTGCGACTTCCCAGTTCGTCCACCTTGGACGCTAACGG
AGTCCAAGGAAGAGCTTGATCGCACCGAGAATCGCTACTTTAAGGAATAC
GTGGACGAGCTGCAGAAAAAGCAGCGTGCTGGAGATTCGAAGGAGCTTTC
GCTGTTTGAGCTGAATCTGGAAACCTGGCGTCAGCTATGGCGTGTCCTGG
AGTTCTCGGACATCCTGCTGATCATTGTGGACGTGCGCTATGCCACGCTG
ATGTTTCCACCCTCCCTGTACGACTATATTATCAACACGCTAAAGAAACA
TGCGATAGTGGTGTTCAACAAGGTGGATCTAGTCGAACCGCATGCGGTGG
TGGCTTGGAGGCAATACTTCCGCGACCGTTACCCCCAGCTACCAGTGGTG
CTCTTTGCATCCTTCCTCCCCCGATCCCGCAAAGGAAGTCAACGTGGTCC
ACAGGCTCATCGCAGGAGTATGGAAGGAGTGTATAATATCTACAAGGAAT
GCCAGCGCTATGTCCAAAGGAGAGGTGGATCTAACAACCTGGAGCAGAAG
ATACGAGAGGACATGCGTAGTGATCAGCTTGACATCCTGATGAATATCAA
CGGCCGTGGAGGGTGAACTCAGATCAGCAGCAGCATCGACACCACGCCCC
ACGAGCACGTTAAATATCACAGTGAGTTCTGACATGCTGCATGATTCCCA
ATGTCGAAAGTCGTCGCTGATCATGCTTAAGGACGCAGGTGTCAGCGTAG
TCGCACGCCCGACATACAAGCACTTTCGACAATTTTCCTCACCCCACTGT
CGCCTTGGAATGCCGTCTATGCCTTTCCTCAGACTCAAGCGTGCAGTCGT
GCTCTGGGCAGTTCCCACATATTGC
FMO02863.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ns4-RA | 1961 | CG9320-RA | 137..1269 | 37..1148 | 5095 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20753172..20753756 | 443..1024 | 2680 | 99.1 | Plus |
| 2L | 23513712 | 2L | 20752779..20753110 | 114..445 | 1660 | 100 | Plus |
| 2L | 23513712 | 2L | 20752612..20752692 | 37..117 | 405 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:35:44 has no hits.
FMO02863.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:02 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:15 Download gff for
FMO02863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ns4-RA | 137..1287 | 37..1162 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:45 Download gff for
FMO02863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ns4-RA | 137..1287 | 37..1162 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:45 Download gff for
FMO02863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20752612..20752690 | 37..115 | 100 | -> | Plus |
| 2L | 20752781..20753109 | 116..444 | 100 | -> | Plus |
| 2L | 20753174..20753916 | 445..1162 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:15 Download gff for
FMO02863.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20752612..20752690 | 37..115 | 100 | -> | Plus |
| arm_2L | 20752781..20753109 | 116..444 | 100 | -> | Plus |
| arm_2L | 20753174..20753916 | 445..1162 | 95 | | Plus |
