FMO02865.5prime Sequence
1209 bp (1023 high quality bases) assembled on 2008-06-10
> FMO02865.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGACAAAATCAAGT
TAAAGGTTATTGGCGTGCTGCGCGAACGCGATGGTGGAAATCGTAGTGGT
TCTGGAGGATTGGGGGCAAGTGCTGGAGCAGGAGCTGGATCTGGCGGAGT
TACGGCAACAGCAGGCCATCAGTTGGCCTCCGCAGGAGGAGCGGGCGTGG
CGCAGCCCTCGATTGGGGTCACACAGGATAATAACAACGAAGGCAACGCC
CCGGGAGGTGGAGGAGCAGTAATCGAACCCCAGGCAACGGGAGGAGCCGC
CGGACCATCTGGTGGAGTTGGTGGCGCCGCTAGAACATCGGTGCTATCCA
GACCGCAGACCTCCAAGATTAGCGCTCTAGACCTGGCCGGTATACTCAAC
ACGCGGAGAAGACTCGAGTGGACCAAGGAGTGGCTGCGCAAAAACCAGAC
CGAGTTTCTCAGCAAGGAGAATTTACTTAGTGAACTGCAGTCGCGCAAGG
ATGAGTGCTATCACTTGAATTACTTTCTAGCCATAACAGAGAGCCAGTTT
CGGTATCTAGTGCAAAAGCTGGAGCCCATCATTAGCCAGTATGCTCCGCA
ACGCAAGAAGAAGTCCTTCAGCGCCGAGGAACGACTGGCCATAACGCTCA
AGTATTTGGCAACGGGTGAAGTACATTCTTGTCGAAACTACTGCTTCCGT
GCCTCGAAATTTGTGATAAACGAAATGATTGCCAATATCTGTCTGGGCTT
CTACGAGCACCTCAAGGACCAATACGTGACACTACCAAAGACTGACGATC
AGTGGCGCAGCGCCGCCGAGGAGATGGAGCGTAAGCACAACCTGCCCCAC
TGTGTGGGCAATCTGTTCATGCGCAGCATCCACTCCAAGGCTTTGGGACC
GCTTCGAGTTCCGGAGCGGCGAGCAGCGCATCCGCCGTTGGCGACGATCG
CAGCGCGCGACCGTCATCTTCCCGGGCATTGTGATGCCGACAACAATTTC
CAGTACGCAAAGGTGGAAAGGCGGCGAGCAGCGGACCCATGTACATCTAT
TAACGAACAGTGCATCGAGCTGATTAGGCAAAGATGCCGCCTCTGGAGAA
CACAGTCGGCGAAATGAACGGACAGCCTTTTACTTTGCTGCAATTCGACT
CGCCTGCACTCGGACTGGGTACAATGCACTGACAAGGATACGGGCCGTAT
ACTTGGAGA
FMO02865.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:35:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7492-RA | 2674 | CG7492-RA | 508..1625 | 34..1140 | 5045 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:35:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 7653459..7654092 | 667..34 | 3170 | 100 | Minus |
| 3L | 28110227 | 3L | 7652980..7653401 | 1080..665 | 1660 | 96.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:35:32 has no hits.
FMO02865.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:01 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:11 Download gff for
FMO02865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7492-RA | 508..1600 | 34..1116 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:39 Download gff for
FMO02865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7492-RA | 508..1600 | 34..1116 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:39 Download gff for
FMO02865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 7652980..7653400 | 666..1080 | 96 | <- | Minus |
| 3L | 7653461..7654092 | 34..665 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:11 Download gff for
FMO02865.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 7646080..7646500 | 666..1080 | 96 | <- | Minus |
| arm_3L | 7646561..7647192 | 34..665 | 100 | | Minus |
