FMO02870.5prime Sequence
1204 bp (1053 high quality bases) assembled on 2008-06-10
> FMO02870.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGCTGATGTTATTCGT
AGTGGAACTGCTGGTTCTACTGGCCAGTTCATCGGTCCTCTCCATCGAGG
TGGACACCGAACTGGGACGGGTGCGAGGAGCCAATCTGACCTCCAGATTG
GGTGTCAACTTTCATGCCTTCCGAGGCATTCGGTATGCAGAGCCACCTCT
GGGAGATTTGCGATTTGTGAATCCGCAGCCAGTGAAGCCCTGGTCCCCGA
AAATCTTCGATGCTAGCGAGGATGGACCGATGTGCCCGCAACCGTGGGAC
AATATGACCGATGTATCTGAGGACTGTCTGAGACTCAATGTGTATACAAA
GGATTTGAAGGGCCGCCGACCTGTGATCGTGTTCCTGCATCCCGGCGGAT
TCTATGTCTTCTCTGGACAGAGTAAATATCTAGCAGGACCGGAGCATTTT
ATGGATCGTGATTGCGTGTTGGTATCGCTAAATTATCGGCTGGGTAGTTT
GGGATTCCTGGCCACCGGAAGTAAGGAAGCTCCTGGCAATGCTGGTCTCA
AGGATCAAGTCTTGGCTTTGCGCTGGATCCAGCAGCACATCCAACGTTTT
GGCGGTGATCCCGATAGTGTAACCCTTCTGGGTTACAGTGCGGGAAGTAT
AAGTGTAGCTCTGCACATGCTATCGCCCATGTCACGTGGTCTATTCCATC
GAGGCATCTGCATGAGTGCTGCTCCATACGGACCAGTTAAGTACAAAGAC
AATGATCTACAACTGGCCAAACGTCAGGCTGGTTTATTGAAGTGTCCACA
GGAATCCATTGGGGAAATGGTGGAGTGTATGAGGCGGAAGCCCTACTTGG
ATTATGTGAGCACTTATAATGGCATGTTTGAATTCGGCTGGAATCCCGTG
CTCAACTGGAGATCGTTGTGGAGAAGGATTTTGGGCAGGAGCGTTACTCA
TCGAAGTCTTTCAACAGCTCGACGTGCGACTTTCACAGTAGCCTCATCAC
CGCATTACGGAGTTTGAGTCTTTCGGCGCTTTCTTGATCTGCAAATGAAA
GCATGTACCGCTATATAGGGATTGGGAACACTATGCTTCTTATGCTGCTC
TTGAACAAACTCACGCATCCGAGCTGCAGTCCATTCGGAAAAATATGCCG
AAGTGGAACTGAATCGATCCTTAGGATGGGTGAACCTTGGAGCACAGCCC
CCTG
FMO02870.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:31:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4757-RB | 2098 | CG4757-RB | 23..1143 | 34..1127 | 4950 | 97.4 | Plus |
| CG4757-RA | 1729 | CG4757-RA | 23..1143 | 34..1127 | 4950 | 97.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:31:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11161229..11162143 | 34..947 | 4525 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:31:58 has no hits.
FMO02870.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:04 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:13 Download gff for
FMO02870.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4757-RA | 23..1121 | 34..1109 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:22 Download gff for
FMO02870.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4757-RA | 23..1121 | 34..1109 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:22 Download gff for
FMO02870.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11161229..11162243 | 34..1033 | 98 | -> | Plus |
| 3R | 11162314..11162375 | 1034..1090 | 91 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:13 Download gff for
FMO02870.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6986951..6987965 | 34..1033 | 98 | -> | Plus |
| arm_3R | 6988036..6988097 | 1034..1090 | 91 | == | Plus |
