FMO02871.5prime Sequence
1236 bp (1043 high quality bases) assembled on 2008-06-10
> FMO02871.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGCCCGCCGATCAGT
TGGCTGAGTTAACCTTGGGTGCAATCTTTACGTCGGAAAAGAAGGGTAGT
GATGAGTCCGGCGATGGCAGTGAGTCCAAGCCCTTCAAGACCATCCTGCA
GGCGATGCGTCATGCGGGCAAGGAACCCTTTCCCACGATTTACGTAGACA
CCAAGGATCCGAATGCAGCGGAGCCCTACGAGCCGGCTGCCAAGTCCCAG
CTGAAGAAAATTCAGAAACTGTTCGTCAGGGAGTCGCACAAGAATGCCGA
TAAGCTGCAACGGGAGGCGGAGGATGCGGAGAAGCGCCAGCAGAATCTGG
AGGATGCTCGAAAGGTGAAGATCTCGGAGGATCCCAGTCTGCCGGTGGCC
CGGAAAATTCGAATCTACGAGGGCACTGCCAACCGCGACTCGCGTGTCAA
GGTCTACGGTTGGGTGCATCGTCTGCGTCGTCAGGGCAAGTCCCTGATCT
TCATAACACTGCGCGACGGCACCGGTTTCCTGCAGTGCGTGCTAAACGAT
CAGCTCTGCCAGACCTACGATGCGCTCACCCTGAGCACGGAAAGCTCTGT
AGTCCTGTTCGGTACCCTGAAACTAGTTCCAGAAGGAAAGACGGCGCCGG
GAGGGCATGAACTGAACGTGGACTACTGGGAGCTGATTGGTCTGGCTCCG
CCCGGCGGTGCCGATGCCATTCTCAACGAGGAAGCACAACCGGACGTGCA
GCTCGACAACCGGCATATCATGATTCGTGGAGAGAACACCTCGAAAGTGC
TCAAGATGCGATCCGTTGTGACGCAAGCATTCCGTGGCCACTACGAGGCG
CGTGGCTATAACGAGGTGACGCCCCCGACTCTGGTACAGACCCAGGTGGA
AGGTGGCTCACGCTCTTCAAGCTTAAGTACTTCGGCGAGGAGGCCTACCT
CACCCAGAGCTCGCAGCTATATCTGGAGACCTGCCTGCGGCATTGGCGAC
GTCTTTACCATTTCCCAGAAGCTATCGTGCGAACAAAGTCGTACGCGGCG
TCACTTTGACTGAATACACGCACGGTGGAAGGCCGACTGTCCGGTTCTTA
CTTTCGATGATCTCGCTGATCGATTGGAGGATCTTGACTTGGACTTGGTG
AATCGGTTCCGAACTCCATGGTACCTGGCCAGGACCTAACCTGACTTCAA
CGCCACTCGAAGAGGCCGTTTCGCTTGCATGTTAAA
FMO02871.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:32:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Aats-asn-RB | 2375 | CG10687-RB | 125..1258 | 35..1167 | 5210 | 97.8 | Plus |
| Aats-asn-RA | 1982 | CG10687-RA | 125..1258 | 35..1167 | 5210 | 97.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:32:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 19130599..19131686 | 1155..68 | 4840 | 97.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:32:11 has no hits.
FMO02871.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:04 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:18 Download gff for
FMO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 119..1240 | 28..1150 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:17:31 Download gff for
FMO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Aats-asn-RA | 119..1240 | 28..1150 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:17:31 Download gff for
FMO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 19130620..19131685 | 69..1134 | 98 | <- | Minus |
| 2L | 19131797..19131836 | 28..68 | 92 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:18 Download gff for
FMO02871.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 19130620..19131685 | 69..1134 | 98 | <- | Minus |
| arm_2L | 19131797..19131836 | 28..68 | 92 | | Minus |
