FMO02875.5prime Sequence
1231 bp (1048 high quality bases) assembled on 2008-06-10
> FMO02875.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAACATTTACAA
CAAGTTGCGGGCCAGGGAGCATGGCTACGGCAATGAGAGGACCTACGACT
TCGCCCTGCGCCGCCTTTCCGTGGCCAAGGAGGACAGCTGGCGGGGCATC
GCGCCGGCCAACTACTGCCCAGACTTCAATCCGGAACCGCCGATCTTCTC
CGCCAAGTTCGCCAACTGCGATGGCTATCGGCACATCCTGGCGATCGCCA
ACGAGGACGGCAAGATCACGCTGCAGGACACCACCCAGCGCAACCACCAG
CCGGAGGAGCAGTCCCTGGTGGGCCCGCAGTGCCACTTCAACGCCGTTTT
CGATCTGGAATGGGCACCCGGCCAGATGCGCTTCGTCTCCGCCTCGGGCG
ATCACACTGCCAGACTGTGGGAGGTGGCGGGCTCCGGCATACGCGGCCTG
AACTCCTATGTGGGTCACACAAGGTCCGTCAAGTCGGCGGCCTTTAAGCG
CACCGATCCCGCTGTCTTCGCCACCGGCGGCCGTGATGGCGCCATTCTCA
TCTGGGACATCAGGGCCAATCTCAATATGGACCTCACGTCACGCGTGGAC
AACTGCATCTACAGCGGTCACACGGGCGGACCGGGCACGCCAGTCTCACA
GCGCAAGCAGCGCACACGCACTCCCAAGATGGCCGGAGGAACCACCTCGA
GCAGCATCACTGGCTTGGCCTTCCAGGACAACGATACGTTGATCTCCTGT
GGTGCCGGTGACGGAGTCATCAAGGTGTGGGACCTGCGGCGCAACTACAC
AGCCTACAAAAAGGAGCCACTGCCCAGGCACAAGCTGCCATATGCCGGCA
GCTCCACCTTCCGTGGATTCACCAACCTCATTGTGGACGCGTCAGGCACG
AGGCTGTATGCCAACTGCATGGACACACCATCTATTGCTACAATCTGGTC
TCCTACTCGCAGCGGCCGCTGGCGTGCTACAGGACTCCTTAACTCACGTT
CTACATCAAATCCTGCCTCAGCCGGACGCAGTATCTGCTGACGGAAGCAG
CGACGAGCGGCTTACATCTGAACCTGACACGCCGAGGAGCGCTCGTTGCA
CTGACGGACAACCGTGGAAGTACCTGCCTGACTGGGTCAGCACGATTGCC
ATGCCCGGCACAGAGTGCCGTTCCAAATCTGGGCGAGTGGAACCGCAACT
GAAATGGCTCTACACAGAGGCGGACACACGT
FMO02875.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| l(2)dtl-RA | 2653 | CG11295-RA | 159..1265 | 37..1127 | 5070 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:07:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23702951..23703988 | 79..1103 | 4585 | 98.4 | Plus |
| 2R | 25286936 | 2R | 23702635..23702678 | 37..80 | 220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:07:59 has no hits.
FMO02875.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:02 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:28 Download gff for
FMO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)dtl-RA | 151..1259 | 30..1122 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:45 Download gff for
FMO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| l(2)dtl-RA | 151..1259 | 30..1122 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:45 Download gff for
FMO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23702627..23702677 | 30..79 | 94 | -> | Plus |
| 2R | 23702952..23704009 | 80..1122 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:28 Download gff for
FMO02875.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19590150..19590200 | 30..79 | 94 | -> | Plus |
| arm_2R | 19590475..19591532 | 80..1122 | 98 | | Plus |
