FMO02877.5prime Sequence
1270 bp (919 high quality bases) assembled on 2008-06-10
> FMO02877.5prime
TATAGCATACAAAAAACGAAGTTATCAGTCGACATGGAAGCGAATGAAAG
TGCGATGCCAGGAACGGACAAATCCCAAGCTTGTCGCACCAGCGGCGATG
GCATGGAGCAACCGGAAAACAGTGGAGCGGCCAAAACAGAGAGCGAAATC
CCAGCGAGTGCTGATGTGGACAACAAGGTAAAGAGGCCACAATTATCGCG
AAAAGACAGCTCCGTTGTCCAGGAGGCCGTCATGGGCAGGAAGACATCAA
CTAGTAGCGGCCACTCCTCAAATTTGCCCCTTCCTGGCTTGCATACCCTG
TACAGACGACCCGAGAACGTCACCCGGAGTTTGGCGCCCGTTGTGCCCAA
GGGGGAGCTGGTCCAGATGCGGCCAAGACTGGTCACCAGCGCGGACTCGC
TGCCCGAACATAAGAAGACCAAGGCGCCCAAATTCGTGCCCTACGAACCA
TATCCGGGTGCCGTGAATCCCATGATCTCTGAGCCAACGAATAAACACAA
AATCCATCGGGATAAGAACAACCTGGACATTGCGGTGCTGGTGGATCAGG
TGTCCACGCTGCGCACACAGGAATTGGAGACTGAGACAACGGATATTAAA
GAAACAGACACAGCCAGTAGCCATGAGGTAAACTCACTTAAAGAGGAGCT
GGCCAAGATGCGCGATGAACGCAATTACTTTCAAGCCCAGTATAAGTTCC
AAACGCAGGTGAATAGCGAGCTGAAAGAGCCTGCTGGTGGCCTCCGTGAG
CGAGGATCTGCAGACACGGGTTAATCTCCTCACCGAGGACAAACTACAGC
TGGCCAGAGCTCTATTGGACACTGCCAACAATTTGACCCCCCACACCGAG
CAGATTGAGTTCTGGCCGGCCAGTGTGAGGGCTGGCGGTCCAAATTCCTC
GCCAGCACGTTATGGTTGAGGAGTTAGCCTCGCTGGAAAGCCGACCTCAC
CCCGAAAATTCAGCTATTGAACGAGTCAACCGAGCCACCTGGCTTCATGC
CACCCATCAGATCCCGGCGAAATTTCAGCTAGATATGCTTAGCAACTGAA
GGTCCCTGGCCAAGATTCGTTTTCCCTCAACCTGCCCGCACACGATGTAA
TTCAGCCTAGGTGCCGAAAACCTTACCATTCCCCCACGCATGGGTCCTGC
ACACTGGGCGGTGCTTTCCGGAAGGAGATACTAAACTTCCACGCCCAGCC
CAGTTCACCCTTGTGTAAGGCCGAAGAATCGCGTAGGGACCTAGTGAAAT
ATCATATGATTTTAGCGCTC
FMO02877.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9356-RB | 1519 | CG9356-RB | 113..1254 | 34..1185 | 5005 | 96.5 | Plus |
| CG9356-RA | 1578 | CG9356-RA | 172..1313 | 34..1185 | 5005 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9402925..9404039 | 1157..34 | 4690 | 96.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:42:21 has no hits.
FMO02877.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:37:59 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:48 Download gff for
FMO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9356-RA | 167..1301 | 26..1172 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:06 Download gff for
FMO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9356-RA | 167..1301 | 26..1172 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:06 Download gff for
FMO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9402910..9404044 | 26..1172 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:48 Download gff for
FMO02877.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5228632..5229766 | 26..1172 | 96 | | Minus |
