FMO02881.5prime Sequence
1218 bp (1011 high quality bases) assembled on 2008-06-10
> FMO02881.5prime
TTCGTATAGCATACATAATACGAAGTTATCAGTCGACATGTCGGATGCCC
ACTTGGAAGCACCGCCTTCGGTGCGACTAACCAACGATGACTTCCGCAAG
CTGCTAGCGACGCCCCGAGCTCCTCCTCCTGGCTCCGGGACGAGCAGCAC
CTCCGCTGGAGGATCTCTGGCCACTGCTACCTTTGCCACGCCCTCCACCG
CCCCCGGCACGACAGGATTGAGTGGCGAAAAGAAGAAGGGTCAGAGCAGC
AGCGAGCGGAATGATCTGCGTCGCAAGAAAAAGAACTTCTATGCGGCGCT
CAAGAAGCAGGAGGATGTGAAGCTGCAAGAGCTGTCCGAGAAGTACAGGG
ACCGAGCACGAGAACGACGCGATGGTGCCAATCCAGATTACGTGAACGTG
AGCACGCCGGGACACGGAAGCAGCACCAATGCGTATCGAGCTGTAGCGCC
AGATATGAAATCCGGAATCGATGCCCAGGAGCGAAGAAGACGTATCATTC
AGGAGTCCAAGTTCTTGGGTGGAGACATCCAGCATACGCATTTGGTGAAG
GGTCTTGATTACGCCCTTCTGCAAAAAGTGCGCTCCGAGCTGCACTCGAA
GGAAGCGGAAGAGGAGGAGATTGCCGCCGCTGTGGCAAGGGAAAAGCTCG
CCGAAGCAGCTGCCGCCGCTGAGCAATTGGAAGCGGAACGCCGCGAGTCG
GAGGATATTAATGCAATCAATGGTGCACTAGCGCGCAATATTTACAATCT
AGTGCAGGCAAGGCGTTCGAAAGAAGTTCCCCGCAATGAGCTATTTGCTC
CAGGACGGATGGCCTATGTGATCGACCTGATGACGAGCTAGGGGAGTCGG
ATATCCCACCACACTGAAGCGCTCCAAGTTCGAGGTGCCGGTGTCACAGA
GGATGTTGCCACGCTGACACCAATGACATTGTGATCAACAAGCTGTCCCA
ATCCTGAGCTATCTACGTGCCGGTGTCGCACAAGAAGAACAAAAAGCGCG
ACAAGGACAAACCGCTGTTCACGAAAAGAAGGTGAAAATCTTCGTGGGTC
GTCTAGCAATGGTGGCCTCAGTCAGCCGCCACTCTCGTCCTCATCGACAT
GGGAGAAATCAGGCTCCCTTTGGGCGAATATATCTAGACGATATAGGGAC
TACACCTTCGGCACGGAACCTTGACGAACCGCCGGGACAGCCAGTTCGCC
CCCTCTCCATACTTAGAG
FMO02881.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| beag-RA | 1882 | CG18005-RA | 85..1217 | 33..1153 | 5120 | 97.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9063921..9064994 | 1097..33 | 4740 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:12 has no hits.
FMO02881.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:02 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:08 Download gff for
FMO02881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 75..1232 | 21..1165 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:10 Download gff for
FMO02881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| beag-RA | 75..1232 | 21..1165 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:10 Download gff for
FMO02881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9063847..9065004 | 21..1165 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:08 Download gff for
FMO02881.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 4889569..4890726 | 21..1165 | 97 | | Minus |
