FMO02884.5prime Sequence
1235 bp (1036 high quality bases) assembled on 2008-06-10
> FMO02884.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGACTCAGAGTCCG
CTTAAGTTGGCCCCCATTTTGGAGGCCCTAGTTCTGATAGTGGTCCTAAT
CAACCAAGTGCAGTGCGGTGAGAATGATATGAGACAAGCGCGCATAAGGC
AGTTTCTGAGTGAGAACCAGCCCCTGGCCCAGCACCATATCAAGCACAAT
CGGCCGCCGGGTCCCGGACAACTGCCCCGGATAAGATCGCGATCGGATAA
CCTGGCCATGCTTTCTGGTGGCTCCAACAAGTTCTTGCGGTCGCCGCAAC
CTGCCACTGCGCAGCACATCATGCGTCGCGAGCAGTTCGGGAACTTTCCT
GCGAACGACCAGCTCAGGAGGTACCAGTTCGACCAGAGTCAGCAGGGCAG
ATTCGCCCACGTAAAGGACACTCCGGTGCTAGATGTGGGCAAAAACCAGT
TCCCACTCCAGTATGTCTCCGAGCAGTACATTCAGAACTTCAAGTCCTCG
CCGCGCTTCAATGGCAATGTGATCATGAAGGACACCAAGCCAGTGTACGC
ACCCATCCAACAGCATGCGATTCCCGTCCAGGCCTCCCAGTACCTGCACT
ATCCCAAGCTCTTCGGACAGCAGGGATCTCCCAGTTTCAGTGTTGTCCCT
ACCCAGCAAACTGCTCTCCAAAACAGCCAGTTTCCCCAGGATCCAAATAG
CTACTCTGTCTACGAGGATACCGATATACCTGCGAAGCAGGCGGTAAACT
TTCGCCAGGCAGTGCCACCACCAAAGGAGTCCAGGGAGGCGCAGACTACC
TGCAATTCATGAGCACCAACGAGTACTTCCTGCCCAAGAGGGATCCTGAC
TTCAAGAAACTGGACGCCGAGCGGGACCAGCAGAGGCTGCTCCACCAATA
TCCACAGCAATACAGACAGCAGCAGCAGCAGCAACTGTATCAGCATCAAC
AGCAGCAGCATCAGCAACCGCAGCACCAGCAGCGCAGCAGCAACAAGCGC
TGCAGCAACATGTTCCCTTACAAAACTGCTGGCCCTAAACAACTCATTCT
CCTCCAGTTACATGAGCCCATACAGGTGTCCGACTTGTTCTACAGCCAGA
TCCCGCTTCTGCCGATTCCGCAATGTTTCGCGCCAGTTACCAGTCAAGGT
CAGAGATGTCTCATGCCAGGTCCGACGCACCAAACCCATAAGACATGTTG
GCTCTCTAACTCTTCACTAGTAGGCGGATTTACGG
FMO02884.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7173-RA | 2439 | CG7173-RA | 467..1592 | 36..1161 | 5255 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21556651..21557760 | 1143..36 | 5080 | 98.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:03 has no hits.
FMO02884.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:04 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:31 Download gff for
FMO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7173-RA | 467..1565 | 36..1132 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:11 Download gff for
FMO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7173-RA | 467..1565 | 36..1132 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:11 Download gff for
FMO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21556702..21557760 | 36..1093 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:31 Download gff for
FMO02884.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21549802..21550860 | 36..1093 | 99 | | Minus |
