FMO02886.5prime Sequence
1229 bp (1055 high quality bases) assembled on 2008-06-10
> FMO02886.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGTCGCGCAAAAT
GGCCAAATTCTACAAGCTGGACATCAATCGCACCGAGTGGGAAATCCCGG
AAACATACCAGAACCTGCAACCCGTGGGTCAGGGTGCCTACGGCCAGGTC
TGCAAGGCCGTGGTCCGCGGAACCAGCACGAAGGTGGCCATCAAGAAGCT
TGCCAGGCCCTTCCAGTCGGCGGTCCATGCGAAGCGCACCTATCGGGAAC
TGCGGCTGCTGAAGCACATGGATCACGAGAACGTTATTGGTCTGCTGGAT
GTCTTTCATCCAGGACAGCCCGCCGATTCGCTGGATCAGTTCCAGCAAGT
GTACATGGTGACCCACTTGATGGACGCCGATCTGAACAACATAATACGCA
CGCAGAAACTGTCTGATGATCATGTCCAGTTTCTGGTCTACCAAATCCTG
CGCGGTCTGAAGTACATCCACAGCGCTGGGGTCATCCATCGTGATCTAAA
GCCATCGAACATTGCGGTAAACGAGGACTGTGAGCTTCGCATCCTGGATT
TCGGTTTGGCCCGTCCCGCAGAAAGCGAGATGACCGGATACGTCGCAACG
CGATGGTACCGGGCGCCTGAGATCATGCTCAACTGGATGCACTACAACCA
GACGGCGGACATCTGGTCGGTGGGCTGCATCATGGCTGAGCTGCTGACTG
GGCGCACGCTGTTCCCTGGAACCGATCACATCCATCAGCTGAACCTCATC
ATGGAAGTGCTGGGCACGCCAGCTGATGAGTTCATGAGCCGCATCTCCTC
GGAGAGCGCTAGAAACTATATTCGTTCACTGCCGGTGATGCCGCGCCGCA
ATTTCCGCGACATCTTCCGCGGTGCCAATCCGCTGGCCATCGATTTGCTG
GAGAAGATGCTGGAACTTGACGCCGACAAGCGCATACCGCCGAGCAGCGC
TGGCCCATCCGTACATGGAGAAGTACCACGATCCAACCGATGGAGCAGAC
CGCCGCGCTCTACGACCAGAGCTTCGAGAGACCGAGCTGCCGTGAAAGTG
GCCGGAGAATGGTCTTCAACGAGGTGACGCTTCAGCCCACAGCGCCTTCG
CTGACTTCTGCCAAGAGCAGCAGCTTCTAGAACCATCTTGGCGGCGGCCA
GGTAGTGCATAATGAAGCTATCGATTCATTCAACATAGCTAGGATCCGTC
ATTGAACATGGGCGTGGAATTCTCTACCC
FMO02886.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:20:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| p38b-RA | 1821 | CG7393-RA | 206..1304 | 33..1120 | 5075 | 98.2 | Plus |
| p38a-RC | 1474 | CG5475-RC | 215..1131 | 61..975 | 1260 | 76.4 | Plus |
| p38a-RB | 1634 | CG5475-RB | 375..1291 | 61..975 | 1260 | 76.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:20:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13780996..13782007 | 33..1042 | 4835 | 99.4 | Plus |
| 3R | 32079331 | 3R | 24150965..24151675 | 771..61 | 1215 | 78.1 | Minus |
| 3R | 32079331 | 3R | 24150804..24150862 | 932..874 | 190 | 88.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:20:49 has no hits.
FMO02886.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:04 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:50 Download gff for
FMO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38b-RA | 203..1304 | 29..1123 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:11:48 Download gff for
FMO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| p38b-RA | 203..1304 | 29..1123 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:11:48 Download gff for
FMO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13780993..13782094 | 29..1123 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:50 Download gff for
FMO02886.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13780993..13782094 | 29..1123 | 97 | | Plus |
