FMO02888.5prime Sequence
1251 bp (1017 high quality bases) assembled on 2008-06-10
> FMO02888.5prime
GTATAGCATACATAAAACGAAGTTATCAGTCGACATGTCGGGCACCATAC
TGGAGAACCTGAGTGGCCGCAAGCTGTCCATATTGGTGGCCACTTTGCTG
CTCTGCCAGGTGTTGTGCTTCCTGCTGGGCGGTCTGTATGCCCCCCTGCC
CGCCGGCCATGTCACCGTGCTGGGATCGCTGTGCCGCGAGGATCACGCCC
GCCAGAATGACACCAGTTTCCTGCTGTACTCACGCGGTGCAGGAGCCTGC
ATCCCAGTGACGCGAGAGGAGGTGGAGCAGGATTCAACAAAGATGGCCAA
TGAGTTGGTGCACGTTTTCCAGATGCCGCTGCCTCGTGACCTGCGCGACC
TGGACTACTCCCGTTGGCAGCAGAATCTGATCGGTGTGCTACAGGTGGAG
TTCGGCTATGATTCCTCGTCGGAGCTAAGGGAACCGCCCAGGGAACTTCA
GTTGACAATCGACATGCGTCTGGCGTACCGAAATAAGGGGGATCCGGACA
ACGGCTGGAAGTTGTACGCCCACGGCGTCGAGCATCGCTACCTGGATTGT
GTCACTTCTCATGTGGGTCCCACAGAAACGCTGTACTCATGCGACATGAT
ACCGCTTTTCGAATTGGGCGCATTGCACCACAGCTTCTATCTGCTGAACT
TGCGTTTCCCGCTGGACACACCGAGCCAAATGAACCTGCAGTTCGGCCAT
ATGCACGATCTCACGCTGACAGCTATTCATCAGAACGGAGGATTCACACA
GATTTGGCTGTTGCTTAAGACAATGCTGTTTCCATTCGTAGTGGGCATCA
TGATATGGTTCTGGAGGCGAGTGCATCTGCTGCACCGATCCCCCGCCCTG
CTGGAGTATATGCTTATCTATTTGGGAGCCGCTCTGAACCTTCCCTCATC
TACCGCTGGAATACTTGTCGCTGGTTACGAAATGCCGTACATGCCTGCTG
CTAAGTGATATTCCCCAAGGCATTCTTTTTATGCCATGCTGCTCAATTTT
CTGGCTGGTCTCGCCCGGTGAACAATTGCTCTATCAGGATGCCTCCGAAC
AGTCACCATTCGCTCGCCGTTACTGGAACATTCTCTCGCCGGTCGTCGTG
GGGCTGCATCCCGCCTGTTCGTCTTCCAACTCTGCCGAAGGGGCGTGCAG
CTATCCATTCAATCTCATCCGAATCGGACACCGCCCTGGGCGCTAGGGGT
ACCATGAACTTCCATGTTTCGTGGCCGCGAAGTTCTGCGCCGACCCGACT
A
FMO02888.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| wls-RB | 2478 | CG6210-RB | 181..1293 | 35..1153 | 4920 | 96.9 | Plus |
| wls-RA | 2574 | CG6210-RA | 181..1293 | 35..1153 | 4920 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11168333..11169445 | 1153..35 | 4645 | 96.2 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:43:51 has no hits.
FMO02888.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:04 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:19 Download gff for
FMO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wls-RA | 173..1305 | 27..1166 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:24:04 Download gff for
FMO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| wls-RA | 173..1305 | 27..1166 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:24:04 Download gff for
FMO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11168321..11169453 | 27..1166 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:19 Download gff for
FMO02888.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11161421..11162553 | 27..1166 | 96 | | Minus |
