FMO02894.5prime Sequence
1146 bp (801 high quality bases) assembled on 2008-06-10
> FMO02894.5prime
GTATAGCATACTTTATACGAAGTTATCAGTCGACATGAGCCAGAACCAAC
TGAGTACGGAGCAACTGCTCTTCGAGGAGAAGCCGCTGTACGTGCCCCCA
TTGTCAGAGTTGCAGAACGTTATACAGGGTGCCCTGGCGGCCAACTTCGC
CAATGTGAATGTCAGTGTGGGCCCTTGTCCGGATCTGAAGGCCAAGCAGT
TCGGCCTGGTGGAGAGTGGACTGGGCGGCAAGCCCACGCTGCTGGAGGCG
GGAGGCCCACCCTTTCTGCTGCCCCTCGTGCAGCGAGATAAGCTGTACAA
CATCGCCGAGATCACGCGAAAGATCCAGGGCCCCGGCACGGTGTTCGCCG
TGGGCGCCGGAACGGGACCTTGGCCCATCCGGGGATCCAACTGCGAGGGC
ATCTTCAACTTGTCCGTGAACGAAAAGGATGAGCTCACGAACGGCAGCTA
CACGGCCACTGTGAGGGGAGAGCAGGAGGAGTGCGTCCTGAAGAAGATAC
CCCACACAGAGCCCAGGTGCGCCCTGCTTCTCAACCTCTTCCTCAGCCAG
GGCAAGCCTGGTCAGGTGTTGAAAATCACCGCCAAGCAGCGCACTGGCGA
ACAGAACTTCATCGAGTGCATCCGCAAGGGCCTGGAGAACCACTACGGGG
ACAAGGTGGTGGGTCTGGGTGGCATTTTTCTGATCAAGAAGGGCGCTGCC
CACAGCACGTGATGCGGGACTTCAGCAAGACGCCCATCAACAGCGACGAG
GAGGTGAACGAGTGGCTCAAGTTCTACGAGATGCCCGCCCAGCTGAACGC
CGTGGGCACGCTGGTGACCAAGGAGCACGACCTGACCTTCGCATGCAGCA
CTTCCACTCATCCTCCTTCAGCACTGGGGCGGTCACTACCATTACGACCC
CCGCCTGGATATCGTTGAGTACCAGGCTACCTGACGTAGCCGACCGGGTG
TGCGGGTGGATAAGCCGTGGCCACTCACAAGTGGGACGCGACGCTAGCCT
TTCTTAGACATTCGTGGCTCGCGGGCCAGTAGTGGCCTAATCTAATCTGA
TCTATGAATCCACCTAGGCTAGGAATCTGCATGACTAGCTTGATTCCCAA
TAAAGGCCGGGCAACGGACGTCGAACAATTCGCAATGGAATTCTGA
FMO02894.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9119-RA | 1212 | CG9119-RA | 157..1122 | 35..992 | 4450 | 98 | Plus |
| CG32335-RB | 1082 | CG32335-RB | 92..984 | 56..943 | 895 | 74.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1203406..1204287 | 992..119 | 3815 | 97.6 | Minus |
| 3L | 28110227 | 3L | 1202056..1202758 | 859..159 | 745 | 74.4 | Minus |
| 3L | 28110227 | 3L | 1204555..1204639 | 119..35 | 425 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:51:23 has no hits.
FMO02894.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:37:59 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:23:44 Download gff for
FMO02894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9119-RA | 149..1130 | 27..1001 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:05 Download gff for
FMO02894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9119-RA | 149..1130 | 27..1001 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:05 Download gff for
FMO02894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1203419..1204286 | 120..980 | 97 | <- | Minus |
| 3L | 1204555..1204637 | 37..119 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:23:44 Download gff for
FMO02894.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1203419..1204286 | 120..980 | 97 | <- | Minus |
| arm_3L | 1204555..1204637 | 37..119 | 100 | <- | Minus |
