FMO02895.5prime Sequence
1239 bp (976 high quality bases) assembled on 2008-06-10
> FMO02895.5prime
TTCGTATAGCATACAATATACGAAGTTATCAGTCGACATGTCCATGCAAA
AGGCCAAAGTCATCGACCAGAAGGAGTACCTCAAGAAGTACCTATCCGGC
GACAAGGAGAAGAAGAAGAAAAAGAAGGAGAAGAAGCACAAAAAGAATTC
GGCCAACACCAAAGTGAAAATCATCGATGACGACGCCTACGAAAATGATA
ATCTGGAAATGGACGAAGATCTACTGCTGGGCGGCGAGGATGCGCCTCAA
ATTGTGGGCGAGTACATCGAAGAGGATCCCAATGTGCGCAGCAAGTGGCG
CAACATTGCCGTCAAGGATGAAATCAAAGAAGAGCACGAGGAATCCTCGC
CAGCAACTGGCATTCGCATCAAACAGGAGCCCTTGGATGAGGAGCAGGAG
ATGTGGGGACGCAAGGCGACAGTTGTTAAGGTTAAGGATGAATTCTCACC
ATCCAGACGAAGTTCACCCGTCAGAATTAAGCAAGAAAAACGCAGCAGCT
CTAGGGATTTAAGCCCAGCGAGATCGAGTAAGCCAGCAAAGCGAGAAGAG
AGTCCTCAAAGGGGGCGAAGAAGGGCGGGAAGCTCAGATCAGAGTCCCAC
CAGACGAGGGCGAGATGGCGATCAGTCTCCGCCACGCCAAAAGCACAGGG
ATTCCGATCAGAGTCCACCCCGAAAGGCTAGGAATGGCAATCAATCGCCA
GTCAGAAAAAGGCGGGATTCCGACCAAAGTCCGCCAAGAAAACGAACGGG
AAAAGCATCACCCACTCGAAGGAGAAAGGATTCCGATCAATCGCCACCCA
GACGCCGCAGAAGTAACTCCGATCAGAGTCCGCCAAGGCGACGTATAGAC
AAGGATTCAACTCCGCCCAGAAGAGAAAGATTCCGATCAAAGCCCACCTC
GAAGCGTAAAGCAGACGATCATCCTCCGGTGCGAAGGGAAAGGAAAGACT
CCGACAAAGTCCGCCTAGGAAACGGAAAGATCAATGACCAGTCTCAGTGC
GAAGAAGCGGATCAGATCAAAGCCCGCCCCGAAACGCAAAAATGACAGCA
AACGCCCGCCAAGAGAAAAGAAACTTCGATCAAGCCCGGCTAGAAAAACC
CAGGATGTAGATCAATCGCCACTGCTAGAGTAACGTGACTTCGAACAGTC
CAACCGAAAACCGGACAATCCCTGCTAGCTCAGATTCGATCAAGCTGCCA
GAATCTCAGAAGTATCGGAGAAGCGCGCTATCTTACACG
FMO02895.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13625-RA | 2094 | CG13625-RA | 81..1225 | 38..1168 | 4905 | 96.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:36:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24583963..24585080 | 1144..38 | 4585 | 96.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:36:11 has no hits.
FMO02895.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:03 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:23 Download gff for
FMO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..1083 | 38..1033 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:11:57 Download gff for
FMO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13625-RA | 81..1083 | 38..1033 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:11:57 Download gff for
FMO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24584078..24585080 | 38..1033 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:23 Download gff for
FMO02895.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 20409800..20410802 | 38..1033 | 98 | | Minus |
