FMO02896.5prime Sequence
1258 bp (866 high quality bases) assembled on 2008-06-10
> FMO02896.5prime
CGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGACAGCAGGGAG
GAGAACGCCGTGTACGATGACATGAACCTGTACATCGCACCGCAGAGCTT
CATCATCGAGCCGAATGGAGGAGATGAGTTGCTGGTCATCGGGCGCCACG
ACAAAGTCACCAGGGTTCAGCCAGCGAGCGGAGGTCTTGTGGCCAACCTT
CGCCCCACCAGGAGGATTTGTGGTGTGCTGGGAACCATTCACCTACTGAG
CTGCGACTACCTTCTGGTGGCGACCCACCGCCTCTTCGTGGGCGTGCTCA
ATGGCGCAGTTGTGTGGAGATTAGCGGGCTATGACATCATACCTTACATT
CCGAATTCCTTCCAGCGCAAGGAGAACGAAAACTACTTGCGACTGCTACG
CCAGACACTTGACACCAAGTTCTTTTACTTCTCCTACCGCTACGACCTTA
CCAATTCGCTGCAGCGACAGCGGGAGGTGGCACAATCGCGGCCTGAAGTA
TCCGGGTTGCTCCAGCGCGCTGAGCAGCGATTCGTTTGGAATGGCTATGT
GCTGCGGCAGTTCAACTGCGATAAGATGGAGAAGTTCCAGCTGCCACTCG
TCCTGGGCTTCGTGTCTATCAACCAGGTGCAGATCAACGGGCAGACATTC
TTTCTGGAGCATCATCACCAGGCGTTCCGTGCAGCGGGCGGGCACACGGC
TCTTCTGCCGAGGCAACGACGAGCAGGGCCATGTTGCGAACTTCGTAGAG
ACCGAGCAAATAGTGGAGTTCAACGGGCAGCTGACTGGATTCGTGCAGAC
ACGAGGCAGCATGCCCTTCCACTGGCACCAGCTGCCCAATTTGCGCTATT
AACCACGACCGTTCTGGTGCCGGCAAAGGATCATTTGGCCGCCTGCGGGC
TCACTTTAAAGAACAAATTCGGCTGTATGGCACCATGGTGGCTGTTGATC
TATGGATCACAAGGTGCCGAAGGCTAGCTCGAGAGCGAACTTATGCCCGC
CTGGTTCGAAGAATGGGAATCCCACAATGGCAATAACGAGTCTTTGACTT
CCACAGCGGAGTGCCGTAAGAATGCGCCTGGGAACGGCTGAACAAATCTC
CTTCGATTGCCCTCGCCCTATGAACAGGGATCAGTTCGGGGTCTATACTA
TGTCTTTCCGACAACGGCAAATTGGGTGTCTCCACGTAATTGGGGTTCTT
TCACAATATTTTCTATATCACACGGTGATCTCTCGCATACAGATGACACA
ACGTCGTC
FMO02896.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:08:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sac1-RB | 2327 | CG9128-RB | 166..1295 | 35..1175 | 4780 | 95.6 | Plus |
| Sac1-RA | 2365 | CG9128-RA | 204..1333 | 35..1175 | 4780 | 95.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:08:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1248290..1249326 | 35..1071 | 4380 | 96.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:08:38 has no hits.
FMO02896.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-06-10 14:38:03 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:04:02 Download gff for
FMO02896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1240 | 35..1071 | 96 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:22 Download gff for
FMO02896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sac1-RA | 204..1240 | 35..1071 | 96 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:22 Download gff for
FMO02896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1248290..1249326 | 35..1071 | 96 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:04:02 Download gff for
FMO02896.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1248290..1249326 | 35..1071 | 96 | == | Plus |
