FMO02901.5prime Sequence
1256 bp (1009 high quality bases) assembled on 2008-07-02
> FMO02901.5prime
ACTTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGGCCTTAA
AGGTTGTGAATTGCAATTGGACAACCCGTGGAACACCTACTACGCCGGTC
AGACGGTCAACGGCCAGGTGAAGTTTACGTTCGACTCGCCCAAAAAAGTC
CGAGGTATTATCATTCGGTTCCTGGGAGAAGCCAACACCGAGTGGTCAGA
GGAGAAGAGCGTAACCACCAGCGAGGGCAAGACCGAGAACGAGGTCACCC
AACTGAAGGGGCATGAGGAGTACTTTAAGATCCAGTACTATCTGCTGGGC
GGCAAAAACAGCTCTGAGACGGAACTACCGCCTGGCACTCACACTTATCC
ATTCACCTGTGCTCTGCCGCCTAATCTACCCTCATCCTTTGAGGGCGAAT
TTGGCCATGTGCGCTATACCATCAAGGTGACGCTTGATCGTCCGTGGAAA
TTCGATCAGGACATGAAGATGGCGTTCACAGTAATAGCGCCCGTTGATCT
AAATCTCAATCCTCGAGTCAAGGAGCCATTCAAGCTCGAGCTAGAAAAGT
CATTCTGCTGTTTTTGCTGTCGCTCAGGACCGCTGGCTGTCATCACGAAC
ATCCCGCAAACAGGATTCGTTTCGGGGCAGGTGCTGCCCATCACCTGCGA
GGTGGACAACACCAGCAACGTAAAATCTTACGGCAGTGAAGTTTGAACTG
CGTAAGCTGGTCACCTTCCACACAAACCAGCCACGGAGCGAGAAGCGCGA
GTCCAAGGTGATCATAGCCCAACTTAAGTGTTGGCCCAGTCAATGGCGGC
GAGTCTCGCACGTTTACGCAACAAAATGGAGATTCCGGCGCTGCCACCGA
CCAACCTCCTCAACTGCGGGATTATCGCTTTGGACTACGACCTGCATGTG
GGAGTGCGAGGTGAGCGGTCCGCAACCGCAATCTCACTGGCAAGGTGCCA
ATCAACCTTGGGCAATAATTCAATTGGCTGGCGTACGGCCACCTACTCAA
TTTACGGATGCTCCGTCCGCCGTTCAGTCCGAGGATCATCGCTGGCGCCC
AACACAAGCCAGTGAGCCCGGCGAGCCCTTCTGCGGCAAATGGCGTGGGT
GGGTGCTTCTAAGGCTGAACGTGGCTGAAAGTCACTGGTGTGTGGTTCCT
GTATCCTATATTACCGCCACCGAGTTGGGCAAAACAGTAACGACAACGAT
TCCCGGTAGGAACAACCTCGAACACTCTCGAAGTGATACTGCGCGAACAG
CGATAC
FMO02901.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1105-RA | 1796 | CG1105-RA | 97..1220 | 38..1172 | 5070 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 7064937..7065720 | 1102..311 | 3315 | 97.5 | Minus |
| 3R | 32079331 | 3R | 7066141..7066299 | 311..153 | 795 | 100 | Minus |
| 3R | 32079331 | 3R | 7066921..7067040 | 157..38 | 600 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:08:25 has no hits.
FMO02901.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:00:31 Download gff for
FMO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1105-RA | 86..1221 | 30..1176 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:35 Download gff for
FMO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1105-RA | 90..1225 | 30..1176 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:56 Download gff for
FMO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1105-RA | 90..1225 | 30..1176 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:56 Download gff for
FMO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 7064878..7065720 | 311..1164 | 96 | <- | Minus |
| 3R | 7066142..7066297 | 155..310 | 100 | <- | Minus |
| 3R | 7066924..7067047 | 30..154 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:35 Download gff for
FMO02901.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2890600..2891442 | 311..1164 | 96 | <- | Minus |
| arm_3R | 2891864..2892019 | 155..310 | 100 | <- | Minus |
| arm_3R | 2892646..2892769 | 30..154 | 96 | | Minus |
