FMO02903.5prime Sequence
806 bp (806 high quality bases) assembled on 2008-07-02
> FMO02903.5prime
TTCGTATAGCATACATTATACGAAGTTATCAGTCGACATGAATCAGTTCC
ACACTCCCTCATTCGGCGACGAGGTGTTTGAGCTGACCGACACGCCGGCG
GAGAGCCAGAGCCCCAGCCAAGCCTCGCGGAGAATGCTTAGCCTGGATCA
ATCCATGTTGAACGACGATGACGAGGAAAATTGCGACACATATGCCAGCG
GCGGCGGGCAGAACTTGCTGGTTCAGCCGGAGCAGCAGCAGAACCAGGCC
ATGGCGCAAGCACCTCCTAAACCTCTGGCGCCCTTCGCTCTGTTCTTTCG
AGACACCGTGACGGCCATCAAGCAGCAGAATCCGACCTGTTCGTTGGAGC
AAATGCAAGTGATAGTGCACACCATGTGGGAGTCCCTGGACGAGACGCAG
AAGAACGTCTATGCCCTACGGCACGAGCAGGAGAAGCGCGAGTATGTCCG
TCTGATGAGGGGCTATCGCCACCAGCTGTCCGAGTCGGAGGGTACGTCGG
AGGCAGAGGCCCCACCAGCAGTAGCTACCAATCAGCCACCTCCTCTAGTC
ACAACCAAATTGGAGTCTGTCGAGGATCTGCAACAGTCGGTGGATGCCCA
GCAGGAGCCGCCGCCCGATCAGATACAGCTCCTCACCGAAGCGGCTAGGG
TGCAAAAGTGCACACGGAAACAGTGCAATAAGCCAGCTATCATAAATCCG
GACTGGGAGGACGAGTACTGCAGCCACGAGTGCGTCGTCATCCACTGCCG
GAATGTATTCAACCACTGGGTAATATCCATGAACTCAGCAAGCTTTTCTA
GACCAT
FMO02903.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:08:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12104-RB | 1398 | CG12104-RB | 103..853 | 37..787 | 3695 | 99.5 | Plus |
| CG12104-RA | 1182 | CG12104-RA | 103..853 | 37..787 | 3695 | 99.5 | Plus |
| CG12104-RC | 1029 | CG12104-RC | 38..700 | 125..787 | 3255 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:08:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 1601271..1601933 | 787..125 | 3255 | 99.4 | Minus |
| 3L | 28110227 | 3L | 1602485..1602572 | 124..37 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:08:31 has no hits.
FMO02903.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:57 Download gff for
FMO02903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12104-RA | 142..902 | 31..794 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:14:37 Download gff for
FMO02903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12104-RA | 98..858 | 31..794 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:48:59 Download gff for
FMO02903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12104-RA | 98..858 | 31..794 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:48:59 Download gff for
FMO02903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 1601266..1601933 | 125..794 | 98 | <- | Minus |
| 3L | 1602485..1602577 | 31..124 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:14:37 Download gff for
FMO02903.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 1601266..1601933 | 125..794 | 98 | <- | Minus |
| arm_3L | 1602485..1602577 | 31..124 | 97 | | Minus |
