FMO02905.5prime Sequence
1268 bp (1008 high quality bases) assembled on 2008-07-02
> FMO02905.5prime
CTTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGCCTTCACAC
ACATGCACACCGACACGGGGACACTCACACAACGAAACCACACACACACA
CACACACACACAAACACTCACACACACACACACAAACACTCTCACACACA
CACATAAACACAAACACGTACAGATGATGAATGTTTATTATTTCCACCAT
CAGGCCGACGAGCTTCTAGGCACTGCCAGCGAGCAATTCCTTGGAAAGAG
CGTCAAGGAGATCAAGCAGACGATCCTGCAAACCCTCGAAGGACATTTGA
GAGCCATATTGGGAACGCTTACAGTAGAAGAGGTGTACAAGGACCGCGAC
CAATTCGCTGCCTTGGTGCGCGAGGTGGCCGCACCGGACGTGGGTCGTAT
GGGCATCGAGATTCTCTCGTTTACGATCAAGGACGTCTACGATGATGTGC
AGTACCTGGCCTCGTTGGGCAAGGCCCAGACCGCCGTGGTCAAGCGGGAT
GCAGATGCCGGCGTGGCGGAGGCCAATCGAGATGCCGGTATCCGTGAGGC
GGAGTGCGAAAAGAGCGCCATGGATGTGAAATACTCGACGGACACGAAAA
TCGAGGACAACACCAGGATGTACAAGCTGCAGAAGGCCAATTTCGATCAG
GAGATCAACACGGCCAAGGCCGAATCGCAGTTGGCCTACGAGCTGCAGGC
AGCCAAGATCCGCCAGCGCATCCGTAACGAGGAGATTCAGATCGAGGTGG
TGGAGCGACGCAAGCAGATCGAGATTGAGTCGCAGGAAGTGCAGCGCAAG
GATCGCGAGCTCACTGGCACAGTCAGCTGCCCGCCGAGGCCGAGGCCTTC
CGCCTCCAGACCCTTGCGCAGGCCAAGCAATGTCAGACCATCGAGGGGTG
CCCGTGCCGGAGGCGGAGCGCATACGCAGGATCCGGATCGGCCGGAGGCT
CATGCCATCGAGTTGGTGGGCAAGCCGGAGCCGGAACGCATGCGGATGAG
GGCCCATTGTGTACAGCAGTACCGCGATGCCACCAATTATGATATTGTAC
TCCGATTCGCTGCCAGATTGCCGCTGGAGGTGCCTGCACCACCTGACCAA
ACCGATGAAAATTGCCCTAATGCCGCCAACGATAATTACCCAACGATGTG
ACTCCCTTGGTGGCCCAGCTACCGCCCACCGAATCACGCCTGGACGAAGT
ATTGGCAAGGTTCTGTTCCAGATCCGGGGGCCAAGGCGAGCAGATCTCTC
TCTACAGACATTTCTGCC
FMO02905.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:37:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Flo2-RM | 2602 | CG32593-RM | 611..1813 | 39..1238 | 5100 | 96 | Plus |
| Flo2-RJ | 3212 | CG32593-RJ | 421..1490 | 172..1238 | 4435 | 95.5 | Plus |
| Flo2-RI | 2240 | CG32593-RI | 382..1451 | 172..1238 | 4435 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:37:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14930746..14931314 | 312..879 | 2795 | 99.8 | Plus |
| X | 23542271 | X | 14926601..14926875 | 39..313 | 1375 | 100 | Plus |
| X | 23542271 | X | 14931802..14931948 | 880..1030 | 370 | 92.1 | Plus |
| X | 23542271 | X | 14932045..14932157 | 1064..1176 | 230 | 84.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:37:44 has no hits.
FMO02905.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:29 Download gff for
FMO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo-2-RC | 611..1821 | 39..1247 | 95 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:53:50 Download gff for
FMO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo-2-RC | 611..1821 | 39..1247 | 95 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:12:53 Download gff for
FMO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Flo2-RM | 611..1821 | 39..1247 | 95 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:12:53 Download gff for
FMO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14926601..14926874 | 39..312 | 100 | -> | Plus |
| X | 14930747..14931314 | 313..879 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:53:50 Download gff for
FMO02905.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14820634..14820907 | 39..312 | 100 | -> | Plus |
| arm_X | 14824780..14825347 | 313..879 | 99 | -> | Plus |
