FMO02906.5prime Sequence
501 bp (501 high quality bases) assembled on 2008-07-02
> FMO02906.5prime
AGCATACCTTATACGAAGTTATCAGTCGACATGTCCCAAGGCGGGGGCAC
TACTCCAGCGGGCGGTAATCCCACAGCGCTCCAGGCGACCGGAGGGGGCG
TGGTCTTCAACAAGGTCTTCATCCAGCGCGATTACAGCGAGGGCACCTCC
GTCAAGTTCCATACACGGCTGCCCGCTGAGCTGGAGGGCATGATTGAAAG
ACACGTCTTCGAGGCCACCATCAATAGGCTAAACGAGTTCTACGCCGAGG
CGGAGGAGGGATCCTGCGGCACCTATTGCGAGGGCTGCATTGGCTGCATC
ACGGCCTACTTGATCTATATGTGCTCCGAAACGCACTATGAAAAGACCCT
TCGCAAGATATCCAAATTTGTGGCTTCCCAAAATGAACGCATTTACAACA
CCAAGGGACTGCAGCTGATCGATCCCACTTATCGGGGACTTCGCGTCATA
GAGATTACAATATTCGATCGTCCGGGGCGAACGGCAAGCTTTCTAGACCA
T
FMO02906.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:42:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5447-RB | 1392 | CG5447-RB | 130..584 | 29..483 | 2245 | 99.6 | Plus |
| CG5447-RA | 1392 | CG5447-RA | 130..584 | 29..483 | 2245 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:42:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26452859..26453022 | 29..192 | 790 | 98.8 | Plus |
| 3R | 32079331 | 3R | 26453088..26453241 | 192..345 | 770 | 100 | Plus |
| 3R | 32079331 | 3R | 26453567..26453706 | 344..483 | 700 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:42:27 has no hits.
FMO02906.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:00:33 Download gff for
FMO02906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5447-RA | 131..591 | 29..491 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:02:51 Download gff for
FMO02906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5447-RA | 130..590 | 29..491 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:11 Download gff for
FMO02906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5447-RA | 130..590 | 29..491 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:11 Download gff for
FMO02906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26452859..26453022 | 29..192 | 98 | -> | Plus |
| 3R | 26453089..26453241 | 193..345 | 100 | -> | Plus |
| 3R | 26453569..26453712 | 346..491 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:02:51 Download gff for
FMO02906.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22278581..22278744 | 29..192 | 98 | -> | Plus |
| arm_3R | 22278811..22278963 | 193..345 | 100 | -> | Plus |
| arm_3R | 22279291..22279434 | 346..491 | 97 | | Plus |
