FMO02911.5prime Sequence
876 bp (876 high quality bases) assembled on 2008-07-02
> FMO02911.5prime
CGTATAGCATACATTATACCAAGTTATCAGTCGACATGCCGGACTACCTG
GGCGACGACCAGCGCAAGGTGAAGCACGATGAGAAGGAGGACAAGGAGAT
CAAGTCCCTCGACAAAGGCGACATTGAGCTTCTAAAGACTTATGGGCAGA
GCCAGTATCACAAATCCATCAAGAGCATCGAGGAGGACATTCAAAAGGCT
GTGAAGCAGGTGAACGAGCTGACTGGAATCAAGGAAAGCGACACGGGTCT
GGCGCCACCAGCGCTCTGGGATTTGGCCGCCGACAAGCAGATCCTGCAAA
ACGAGCAACCGCTGCAGGTTGCCCGATGCACCAAGATCATCAACGCGGAT
TCCGACGACCCCAAGTATATCATCAATGTTAAGCAGTTCGCCAAGTTCGT
GGTGGACCTAGCTGACTCGGTGGCCCCTACTGACATAGAAGAGGGAATGC
GTGTGGGTGTCGACCGCAACAAGTACCAGATCCACATTCCGCTGCCTCCC
AAGATTGATCCTACGGTTACCATGATGCAGGTTGAGGACAAGCCGGACGT
CACCTACAGCGATGTGGGCGGCTGCAAGGAACAAATCGAAAAGCTGCGCG
AGGTGGTGGAGACGCCACTGCTGCACCCGGAAAAGTTCGTCAATCTGGGT
ATTGAGCCGCCCAAAGGTGTGCTACTGTTTGGCCCACCGGGAACGGGAAA
GACCCTGTGTGCCCGCGCCGTTGCCAACCGCACGGACGCTTGCTTTATCC
GCGTCATTGGCTCTGAGCTGGTGCAAAAGTACGTGGGTGAGGGCGCTCGT
ATGGTGCGCGAGCTCTTCGAAATGGCGCGTTCCAAAAAGGCTTGTCTCAT
CTTCTTCGACGAAATTGATGCTATCG
FMO02911.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:13:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Rpt1-RA | 1515 | CG1341-RA | 118..958 | 36..876 | 4190 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:13:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7652997..7653837 | 876..36 | 4190 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:13:14 has no hits.
FMO02911.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:00:56 Download gff for
FMO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpt1-RA | 112..952 | 36..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 00:59:37 Download gff for
FMO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpt1-RA | 118..958 | 36..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:45:16 Download gff for
FMO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Rpt1-RA | 118..958 | 36..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 22:45:16 Download gff for
FMO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7652997..7653837 | 36..876 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 00:59:37 Download gff for
FMO02911.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3540502..3541342 | 36..876 | 99 | | Minus |
