FMO02915.5prime Sequence
560 bp (560 high quality bases) assembled on 2008-07-02
> FMO02915.5prime
CGTATAGCATACCTTATACGAAGTTATCAATCGACATGTCTGCTAACGGA
GATTACAAGAACGCCGCCTCGATCTACGAGTTCACCGTGAAGGATACCCA
TGGCAACGATGTTTCCCTGGAAAAGTACAAGGGCAAGGTGGTCCTGGTGG
TGAACATCGCCTCCAAGTGCGGCCTGACCAAGAACAACTACGAGAAGCTG
ACGGATCTAAAGGAGAAGTACGGCGAGCGCGGCCTGGTGATCCTCAACTT
CCCGTGCAATCAGTTTGGGTCCCAGATGCCGGAGGCCGATGGAGAGGCCA
TGGTGTGCCACCTGCGCGACTCCAAGGCTGACATCGGCGAGGTGTTCGCC
AAGGTCGATGTGAATGGAGACAATGCGGCGCCGCTGTACAAATACCTAAA
GGCCAAGCAGACCGGCACCCTGGGCAGCGGAATCAAGTGGAACTTCACCA
AGTTTCTGGTGAACAAGGAGGGCGTGCCCATCAACCGATATGCCCCGACC
ACCGATCCCATGGACATCGCCAAGGACATTGAAAAGCTGCTGGCAAGCTT
TCTAGACCAT
FMO02915.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| PHGPx-RA | 803 | CG12013-RA | 103..616 | 29..542 | 2570 | 100 | Plus |
| PHGPx-RC | 1148 | CG12013-RC | 448..961 | 29..542 | 2570 | 100 | Plus |
| PHGPx-RD | 1014 | CG12013-RD | 315..827 | 30..542 | 2565 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 3327860..3328185 | 30..355 | 1630 | 100 | Plus |
| 3L | 28110227 | 3L | 3328249..3328439 | 352..542 | 955 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:35:09 has no hits.
FMO02915.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:32 Download gff for
FMO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PHGPx-RC | 422..935 | 29..542 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:13 Download gff for
FMO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PHGPx-RC | 448..961 | 29..542 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:02 Download gff for
FMO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| PHGPx-RC | 448..961 | 29..542 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:02 Download gff for
FMO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 3327854..3328183 | 24..353 | 99 | -> | Plus |
| 3L | 3328251..3328439 | 354..542 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:13 Download gff for
FMO02915.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 3327854..3328183 | 24..353 | 99 | -> | Plus |
| arm_3L | 3328251..3328439 | 354..542 | 100 | | Plus |
