FMO02921.5prime Sequence
1184 bp (1031 high quality bases) assembled on 2008-07-02
> FMO02921.5prime
CGTATAGCATACATAATACGAAGTTATCAGTCGACATGAAGTCGGTTCAG
TGGGTGAAAATATTGCTTTGCCTGATCCTTGCGTGCGTCAATGTATTCCT
CTTCGTGGTGTCTTGGGGAGTGGACTATCGCATCTTGGTAGCTAGGGAGC
ATATACGCTTCCGCCAGGAGATGCCCACCATGGACAGTTGGATAAACTCG
CCATTCGGGAAGCTGAAAAACTATGTGTTCAACGTGACCAACGCCGAGGA
GTTTCGCAGCGGTCGTGATAGCAGACTTAAGGTAAAGGAGATCGGCCCCA
TTGTGTACAGAATCGTGGGGTTCAACGACATCTTAGATCGCAACGAGACC
AACGTTAGGTATCGCAAGCACAGATACCGCGTAGTGGAATTCCTCCCGGA
GGAAAGCGTAGCACCCGACGTCCTTAACTGGACCATTACCTCCACAAACA
ACGTTATCCTGGGCGCAGCGACGAAAGTCAAGCATACGGCGCCACTTGCA
GCCTTCGGTTTTGATGCAGCGCTCATGATGGAGGATATATTTGTTACAGA
CAGCGTATACTACTTCCTGTGGGAGTTCACCCGTCCCCTGCTGCAAACGC
TCTCCAGGATCTCGAACATAAGACCCAACGTCGCTGTTCTCTACAACGCT
CTCAAAGAGAAGGAAGAGGTTTACACAGTCAACATCGGCCCTAAGCGCGG
CATTGAAAACTTTTTCCGCATCGAGACGCTTAACGGCGAGGTGATCATCC
GGGAACAACTTCCGCACACCCGTCAGTACGACTCCAACTCTTGCCCCTTT
AACGTTTCCGGAGCGCTGGACAACTCTCTCTTTCCTCCCTTTGTCCAGCC
GGATACGCCGCTGAGCATAGTGGCTATCGAGTCCTGCCGGGTCCTTCCGC
TGACCTACCAGCGTCAGGAGCGTTACAACGGCCTTGAATACTTTCCGCTA
CATCTGCTTCAGTCACATCAAAAGCCTCCCGGCTGCCTGACACAAAGCTA
CGTGTTCAGCTACCCGACGGAATGTTGACGTATTCCCAGTGTGTTGAATA
AATGACGCCCCCCTCTGGTTTTCGATGCCACACCTTTTACGGGAGCCAGC
TACAACTGGAGCAGCACTACGAAGGATACCCACCCCACGCGAGAATCCGA
GCTATACTTGTCTTGAACCGTCTCTGCTATTTCG
FMO02921.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2736-RA | 1726 | CG2736-RA | 84..1205 | 36..1157 | 5130 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24974646..24975258 | 648..36 | 3065 | 100 | Minus |
| 2R | 25286936 | 2R | 24974205..24974584 | 1026..648 | 1635 | 97.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:59:33 has no hits.
FMO02921.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:07 Download gff for
FMO02921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2736-RA | 106..1230 | 29..1152 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:56 Download gff for
FMO02921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2736-RA | 76..1200 | 29..1152 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:28 Download gff for
FMO02921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2736-RA | 76..1200 | 29..1152 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:28 Download gff for
FMO02921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24974182..24974584 | 648..1051 | 97 | <- | Minus |
| 2R | 24974647..24975264 | 31..647 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:56 Download gff for
FMO02921.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20861705..20862107 | 648..1051 | 97 | <- | Minus |
| arm_2R | 20862170..20862787 | 31..647 | 99 | <- | Minus |
