FMO02929.5prime Sequence
907 bp (907 high quality bases) assembled on 2008-07-02
> FMO02929.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGACTTACAGCA
TATGGAGAATGGTCTAAGCGGCGGGGGAGGAGGTGGCCTAAGCGAAATAG
ATTTCCAAAGGCTGGCCCAGATTATAGCCTCCAGCATCCAGAAGGTGCAG
CAGAATGTGTCCACGATGCAGCGCATGGTCAATCAACTGAACACGCCCCA
AGATTCTCCGGAGCTCAAGAAGCAGCTCCACCAAATAATGACCTACACCA
ACCAGCTGGTGACCGACACAAACAATCAAATCAACGAGGTGGACAAGTGC
AAGGAGCGCCACCTGAAGATCCAGCGGGATAGGCTCGTGGACGAGTTCAC
GGCGGCACTGACCGCCTTCCAGTCTGTTCAGCGCAAGACGGCGGACATAG
AGAAGACGGCGTTGCGGCAGGCGCGCGGAGATAGCTACAACATCGCCCGT
CCACCCGGCTCATCGCGTACCGGCAGCTCCAACAGTAGCGCCAGCCAGCA
GGACAACAACTCCTTCTTCGAGGACAACTTCTTCAATCGCAAATCAAACC
AGCAACAGATGCAGACTCAGATGGAGGAGCAGGCGGACCTGCAGGCCCTC
GAGGAACAGGAGCAGGTCATACGGGAGTTGGAGAACAACATCGTGGGCGT
GAACGAGATATACAAGAAGCTTGGCGCCCTGGTCTACGAGCAGGGACTGA
CGGTGGACTCCATCGAGTCGCAGGTGGAACAGACTAGCATTTTTGTCTCG
CACGGCACGGAAAATCTGCGCAAGGCGAGCTCTTACAGGAACAAGTGCGC
AAGAAGAAGCTTATTTTGGTGGGCATCCTGAGCGCCGTGCTGCTGGCCAT
CATCTTGATACTCGTTTTTCAGTTCAAGAATGCAAGCTTTCTAGACCATT
TCGTTTG
FMO02929.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Syx7-RB | 1610 | CG5081-RB | 284..1130 | 36..881 | 4180 | 99.6 | Plus |
| Syx7-RA | 1573 | CG5081-RA | 247..1093 | 36..881 | 4180 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21447079..21447497 | 371..789 | 2080 | 99.8 | Plus |
| 3L | 28110227 | 3L | 21446863..21447007 | 228..372 | 725 | 100 | Plus |
| 3L | 28110227 | 3L | 21446254..21446375 | 36..157 | 595 | 99.2 | Plus |
| 3L | 28110227 | 3L | 21447560..21447648 | 793..881 | 445 | 100 | Plus |
| 3L | 28110227 | 3L | 21446442..21446512 | 157..227 | 355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:26:29 has no hits.
FMO02929.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:38 Download gff for
FMO02929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx7-RB | 296..1152 | 36..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:21 Download gff for
FMO02929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx7-RA | 247..1103 | 36..891 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:20 Download gff for
FMO02929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Syx7-RA | 247..1103 | 36..891 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:20 Download gff for
FMO02929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21446863..21447007 | 228..372 | 100 | -> | Plus |
| 3L | 21446254..21446375 | 36..157 | 99 | -> | Plus |
| 3L | 21446443..21446512 | 158..227 | 100 | -> | Plus |
| 3L | 21447081..21447497 | 373..789 | 99 | -> | Plus |
| 3L | 21447556..21447658 | 790..891 | 95 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:21 Download gff for
FMO02929.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21440656..21440758 | 790..891 | 95 | | Plus |
| arm_3L | 21439354..21439475 | 36..157 | 99 | -> | Plus |
| arm_3L | 21439543..21439612 | 158..227 | 100 | -> | Plus |
| arm_3L | 21439963..21440107 | 228..372 | 100 | -> | Plus |
| arm_3L | 21440181..21440597 | 373..789 | 99 | -> | Plus |
