Clone FMO02947 Report

Search the DGRC for FMO02947

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:29
Well:47
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG9328-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02947.5prime Sequence

482 bp (482 high quality bases) assembled on 2008-07-02

> FMO02947.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGATGTCCATGACC
AGCTCCCCGCCGGCCACACCCACTGGCGTCCAGACGGACTCCGACGGGCT
GATCCTGCCTAAGAAGCTCATCAATCCCTGCATGGAGAACATCGATCGCA
AGGAGTTGCACCGGGAGCTCAAGTTCAATGCCAGAGTGGGAAAGAGCGTG
CTGAACCAGAAATCAGAATTGCAACGTGCCTACGACAAGCAAAAGGAGCG
GCATGCCGCGGCCGAGCAACATTCGCCGGATGCGGACATTGTCGGCGGGA
TTCCAGGACTGAAAGGAGAACTCGGGCGCGTGATCATGGAGCGGGCGCAG
AAGCATGAGGCGGCGGCTCAGAAGCAGGATCAGGAGGACGCCGAGGAGCG
GCAGTACGTGAATCCCGAGTATCTGAACGTGCGGGCCAAGCTGCGCACGG
CGCACGCCAACAATGCAAGCTTTCTAGACCAT

FMO02947.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:35:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG9328-RA 1501 CG9328-RA 451..879 36..464 2100 99.3 Plus
CG9328-RB 1600 CG9328-RB 851..1279 36..464 2100 99.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:35:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20813433..20813709 188..464 1340 98.9 Plus
2L 23513712 2L 20813206..20813358 36..188 765 100 Plus
Blast to na_te.dros performed on 2014-11-28 22:35:28 has no hits.

FMO02947.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:39 Download gff for FMO02947.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9328-RB 835..1267 36..469 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:00:19 Download gff for FMO02947.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9328-RB 851..1283 36..469 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:19:12 Download gff for FMO02947.5prime
Subject Subject Range Query Range Percent Splice Strand
CG9328-RB 851..1283 36..469 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:19:12 Download gff for FMO02947.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 20813206..20813357 36..187 100 -> Plus
2L 20813433..20813713 188..469 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:00:19 Download gff for FMO02947.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20813206..20813357 36..187 100 -> Plus
arm_2L 20813433..20813713 188..469 98   Plus