FMO02948.5prime Sequence
662 bp (662 high quality bases) assembled on 2008-07-02
> FMO02948.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGTCCTCGCAA
GTCTCAAACAAATCGGGCTCCGGTTGGCCGCGCCGCGGAAGCCAAGGCCA
AGCGGATGCAGCCAGCAGCAATAACAACGGTACCCAGAAGTACACCAACC
AGGCGCTAACCATCAATCGCACCATCAACTTATACCCCCTTACGAACTAC
ACATTCGGCACCAAGGAGCCGCTCTTTGAGAAGGATCCGTCGGTGCCATC
CCGATTCCAGCGGATGCGCGAGGAATTCGACCGGATCGGAATGCGGCGCT
CCGTCGAGGGAGTGCTTCTGGTCCACGAGCACGGACTGCCACATGTCTTG
CTCCTGCAGCTGGGCACCACGTTCTTCAAATTGCCCGGTGGCGAGCTAAA
CGCCGGCGAGGATGAGGTCGAGGGCCTCAAGAGATTGCTATCCGAGACGC
TGGGTCGTCAGGACGGCGTAAAGCAGGAGTGGATTGTTGAGGACACGATT
GGGAACTGGTGGCGGCCGAACTTTGAGCCACCGCAATATCCATACATTCC
GCCGCACATCACCAAGCCCAAGGAGCACAAGCGGCTTTTCCTCGTCCAGC
TACATGAAAAGGATACGGACGGGAACGCCAGTTACGATGTACCCGCAAGC
TTTCTAGACCAT
FMO02948.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:14:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3689-RB | 2225 | CG3689-RB | 239..847 | 36..644 | 3045 | 100 | Plus |
| CG3689-RC | 1177 | CG3689-RC | 239..815 | 36..612 | 2885 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 9411479..9411743 | 182..446 | 1325 | 100 | Plus |
| 3L | 28110227 | 3L | 9411815..9411982 | 445..612 | 840 | 100 | Plus |
| 3L | 28110227 | 3L | 9411276..9411421 | 36..181 | 730 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:14:08 has no hits.
FMO02948.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:00:39 Download gff for
FMO02948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3689-RB | 218..831 | 36..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:43 Download gff for
FMO02948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3689-RB | 239..852 | 36..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:03:41 Download gff for
FMO02948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3689-RB | 239..852 | 36..650 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:03:41 Download gff for
FMO02948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 9411278..9411421 | 38..181 | 100 | -> | Plus |
| 3L | 9411479..9411743 | 182..446 | 100 | -> | Plus |
| 3L | 9411817..9411982 | 447..612 | 100 | -> | Plus |
| 3L | 9412155..9412191 | 613..650 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:43 Download gff for
FMO02948.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 9404378..9404521 | 38..181 | 100 | -> | Plus |
| arm_3L | 9404579..9404843 | 182..446 | 100 | -> | Plus |
| arm_3L | 9404917..9405082 | 447..612 | 100 | -> | Plus |
| arm_3L | 9405255..9405291 | 613..650 | 92 | | Plus |
