FMO02949.5prime Sequence
702 bp (702 high quality bases) assembled on 2008-07-02
> FMO02949.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTCCGTTTCCTCGAA
CGCCTCATCCGCCTCCAACAAGGACAGCGTGGACAGCCCCAGCAGCACCA
CCAACACGGACAGCTCCGAGCTGACGCACATCCTCAATCGGCGCCAGGAG
ATCATGGAGTCCCAGGAGGCGGGCATCGAGGTGCGTCGCACCTACAAAGT
GGTCAACGTCTACACCGACTTCCCCGAGTTCTCCCGTAACCAGATCAAGG
ACTACCAGAAGACCTTCAATACATACGATACGGCTCGTGATGGCTTCTTG
GACCTGCAGGAGCTGAAGTTCATGATGGAGAAGCTGGGCGCTCCGCAAAC
CCATCTGGGACTCAAGCAGATGATTGCCGAGGTGGACGAGGATAACGATG
GCAAGATTTCATTCCGAGAGTTCTTGCTGATCTTCAGGAAGGCCCAGGCC
GGGGAACTGGACTCCGATTCTGGGCTGAATCAGCTGGCCCGCCTCACGGA
GGTCGATGTGGAGCAGGTGGGAGTGAGCGGAGCCAAGAACTTCTTCGAGG
CGAAAATTGAGCAACAGCTGCGGACGAACAAGTTCCACGACGAGATTCGG
GCGGAGCAGGAGGAGCGCCGGCGAGAGGAGGAGGAGCGGGCCCAGCGGCG
TCAGCAGTTCCAGCAGCGGGCAGCGATCTTCCAGGCAAGCTTTCTAGACC
AT
FMO02949.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:38:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Swip-1-RB | 1860 | CG10641-RB | 371..1021 | 34..684 | 3255 | 100 | Plus |
| Swip-1-RA | 1628 | CG10641-RA | 371..1021 | 34..684 | 3255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:38:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18978358..18978769 | 684..273 | 2060 | 100 | Minus |
| 2L | 23513712 | 2L | 18986672..18986910 | 272..34 | 1195 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:38:23 has no hits.
FMO02949.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:02:03 Download gff for
FMO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10641-RA | 367..1017 | 34..684 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:03 Download gff for
FMO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Swip-1-RA | 371..1021 | 34..684 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:15 Download gff for
FMO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Swip-1-RA | 371..1021 | 34..684 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:15 Download gff for
FMO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18978358..18978769 | 273..684 | 100 | <- | Minus |
| 2L | 18986672..18986910 | 34..272 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:03 Download gff for
FMO02949.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18978358..18978769 | 273..684 | 100 | <- | Minus |
| arm_2L | 18986672..18986910 | 34..272 | 100 | | Minus |
