FMO02951.5prime Sequence
1106 bp (1026 high quality bases) assembled on 2008-07-02
> FMO02951.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGACGAGAAGCTAA
AATATTCTCTGCTGCGCGGGGAACTGGTGGACACGCAGAGCATTTGGACC
AGGCATGAGAAGCGTGTCTGGTTCATCACCCTTATTACGGGCACCTGTAT
GCTGTACTCCACCCGCACCACTATGCCACTTCTTGTGCCGGCCGTGGCAT
CCGCCCAAAAGTGGAGCAAAACCGACTCGGGCACTGTGCTCAGCTCCTTC
TTCTGGGGCTACACACTCACGCAGGTTGTGGGCGGCTACTTCAGCGACCG
CTTTGGAGGCCAGCGAGTCATTCTGTTTGCCGCAATCGGCTGGTCGCTTA
TCACATTCCTAATGCCCACTATCATCTGGACGGCGGGCTCCATCAAGAGT
TACGCTATTCCCTTCATTGTTGCCATTCGAATCCTGAACGGCGCTCTTCA
GGGCGTGCACTTTCCTAGCATGATTAGTCTAACCAGTCAGAATTTGTGCC
CCAATGAGAGAAGCAGCTTCTTTGGGCTGCTCACAGCGGGATCGGCTCTA
GGTACTCTTCTGACTGGGATTATGGGATCTTTTCTGCTGGACTACTTCGG
CTGGTCGTATGTATTCCGGGTGATAGGACTGATGGGCATCGCATGGGCGC
TGGTGCTGCGCTACTATGCAATGGCCGGCGAGCGAAACCGAATCATTAAT
ATTGCCACGCCATCCCGACTGTGCGCGAACAAGAGTCCGGCAGAGACGTC
AGCCGTGCCTTGGTTGCGATACTTTCGTAGGCTGTCCTTCTGGGCCTGTG
TGCTGACTCACGCCTGCGAGATGAACTGCTTCTTCGTGCTACTCTCCTGG
CTGCCTACATACTTCCACGACGGCTTTCCACACGCCAAGGGTTGGGTAGT
GAACATGATCCCGTGGCTTGCCCTGCCACCGTGCACGCTATTCGCCAAGT
ACTTGACCACAGATTACTCGCTCGCGAATGGCACACGACGACGGTGTGCA
AGGTCATCCAAAGTTGCTTGCTTTGCCGCTCAAATCTGGCCTGTTTGGAT
GACCCGCACCTCGGACTTCCCATACGGGGCTCTATCTGCGATGAGACATT
AATATT
FMO02951.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MFS18-RA | 1846 | CG15438-RA | 208..1264 | 34..1089 | 5080 | 99.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4447269..4447854 | 1070..488 | 2655 | 98.8 | Minus |
| 2L | 23513712 | 2L | 4447906..4448296 | 490..100 | 1955 | 100 | Minus |
| 2L | 23513712 | 2L | 4448359..4448428 | 103..34 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:26:26 has no hits.
FMO02951.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:23 Download gff for
FMO02951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15438-RA | 205..1276 | 29..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:19 Download gff for
FMO02951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MFS18-RA | 203..1274 | 29..1101 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:18 Download gff for
FMO02951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MFS18-RA | 203..1274 | 29..1101 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:18 Download gff for
FMO02951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4447242..4447851 | 491..1101 | 97 | <- | Minus |
| 2L | 4447906..4448293 | 103..490 | 100 | <- | Minus |
| 2L | 4448360..4448433 | 29..102 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:19 Download gff for
FMO02951.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4447242..4447851 | 491..1101 | 97 | <- | Minus |
| arm_2L | 4447906..4448293 | 103..490 | 100 | <- | Minus |
| arm_2L | 4448360..4448433 | 29..102 | 97 | | Minus |
