FMO02956.5prime Sequence
997 bp (997 high quality bases) assembled on 2008-07-02
> FMO02956.5prime
TTCGTATAGCATACCTTATACGAAGTTATCAGTCGACATGACCACCATTC
TAGATAACTTTCAACGCGCCGAAAAGATTGGCGAGGGCACCTACGGTATA
GTTTACAAAGCGCGTAGCAACTCCACCGGCCAGGATGTGGCCCTCAAAAA
GATTCGGCTAGAAGGCGAAACGGAGGGTGTTCCTTCGACGGCCATTCGAG
AGATCTCCCTGCTGAAGAACCTTAAGCACCCAAATGTGGTCCAACTATTT
GACGTAGTCATTTCCGGCAACAATCTGTACATGATATTCGAGTACCTGAA
CATGGATCTAAAGAAGCTGATGGATAAGAAAAAAGACGTGTTCACCCCTC
AGTTGATAAAGAGCTATATGCATCAGATATTAGATGCCGTCGGCTTTTGC
CACACGAATCGTATCCTGCATCGCGATCTCAAGCCCCAGAACCTTCTCGT
AGACACGGCGGGCAAAATAAAGTTGGCTGACTTTGGCCTAGCAAGGGCCT
TCAACGTGCCTATGCGGGCGTACACACACGAAGTCGTCACCCTCTGGTAC
CGAGCTCCAGAGATTCTGTTGGGCACGAAATTCTACTCCACGGGCGTGGA
CATCTGGAGTCTAGGCTGCATTTTCTCTGAAATGATTATGCGCCGCTCCT
TGTTTCCTGGAGACAGCGAGATCGATCAACTTTATAGGATTTTCCGTACC
TTAAGCACACCTGATGAAACAAATTGGCCTGGTGTGACGCAGCTGCCAGA
CTTTAAGACCAAGTTCCCTAGATGGGAGGGAACTAACATGCCACAACCCA
TAACCGAACACGAGGCGCACGAACTCATAATGTCAATGCTGTGCTATGAT
CCCAACCTGCGCATCTCAGCCAAGGACGCACTGCAGCACGCTTACTTCCG
CAATGTGCAGCATGTTGACCATGTAGCCCTGCCTGTAGATCCCAATGCCG
GCAGCGCTTCGCGTCTAACGCGGCTCGTCGCAGCTTTCTAAGACCAT
FMO02956.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:13:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cdk2-RC | 2224 | CG10498-RC | 75..1016 | 38..979 | 4710 | 100 | Plus |
Cdk2-RB | 1215 | CG10498-RB | 75..1016 | 38..979 | 4710 | 100 | Plus |
Cdk2-RA | 1140 | CG10498-RA | 75..1016 | 38..979 | 4710 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:13:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20736731..20736929 | 634..832 | 995 | 100 | Plus |
3R | 32079331 | 3R | 20736090..20736286 | 165..361 | 985 | 100 | Plus |
3R | 32079331 | 3R | 20736509..20736672 | 471..634 | 820 | 100 | Plus |
3R | 32079331 | 3R | 20736984..20737131 | 832..979 | 740 | 100 | Plus |
3R | 32079331 | 3R | 20735697..20735824 | 38..165 | 640 | 100 | Plus |
3R | 32079331 | 3R | 20736339..20736451 | 360..472 | 565 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:13:19 has no hits.
FMO02956.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:00:46 Download gff for
FMO02956.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cdc2c-RB | 73..1019 | 31..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:28 Download gff for
FMO02956.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
cdc2c-RA | 70..1016 | 31..979 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:58:14 Download gff for
FMO02956.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cdk2-RA | 70..1016 | 31..979 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:58:14 Download gff for
FMO02956.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20736732..20736929 | 635..832 | 100 | -> | Plus |
3R | 20736985..20737131 | 833..979 | 100 | | Plus |
3R | 20735694..20735824 | 35..165 | 98 | -> | Plus |
3R | 20736091..20736286 | 166..361 | 100 | -> | Plus |
3R | 20736341..20736451 | 362..472 | 100 | -> | Plus |
3R | 20736511..20736672 | 473..634 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:28 Download gff for
FMO02956.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16561416..16561546 | 35..165 | 98 | -> | Plus |
arm_3R | 16561813..16562008 | 166..361 | 100 | -> | Plus |
arm_3R | 16562063..16562173 | 362..472 | 100 | -> | Plus |
arm_3R | 16562233..16562394 | 473..634 | 100 | -> | Plus |
arm_3R | 16562454..16562651 | 635..832 | 100 | -> | Plus |
arm_3R | 16562707..16562853 | 833..979 | 100 | | Plus |