FMO02959.5prime Sequence
855 bp (855 high quality bases) assembled on 2008-07-02
> FMO02959.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCGGACGAAGC
TCCAGCCCGTAGTGGATTCCGTGGCGGATTTGGCTCTCGTGGTGGTCGTG
GTGGACGCGGTCGTGGCCGTGGACGCTGGGCCCGTGGACGTGGAAAGGAG
GACTCCAAGGAGTGGGTGCCAGTGACCAAGCTGGGACGCCTGGTGCGCGA
GGGCAAGATCAAGTCTTTGGAGGAGATCTACCTGTACTCGCTTCCCATCA
AAGAGTTCGAGATCATCGACTTCTTCCTGGGATCCTCGCTGAAGGATGAG
GTGCTGAAGATCATGCCCGTCCAGAAGCAGACCCGTGCTGGTCAGCGTAC
CCGTTTCAAGGCCTTCGTTGCCATCGGCGACAACAATGGCCACATTGGTC
TGGGCGTTAAGTGCAGCAAGGAAGTGGCCACCGCCATCCGTGGTGCCATC
ATTCTGGCCAAGCTCTCCGTGGTGCCCGTGCGCCGTGGCTACTGGGGCAA
CAAGATCGGCAAGCCCCACACCGTGCCCTGCAAGGTCACCGGCAAGTGCG
GATCCGTCTCCGTGCGCCTCATCCCCGCTCCCCGTGGTACTGGCATTGTC
TCGGCCCCCGTGCCCAAGAAGCTGCTGACCATGGCCGGTATTGAGGATTG
CTACACCTCGGCCCGTGGCTCCACTGGAACCCTCGGCAACTTCGCCAAGG
CTACATATGTCGCCATCGCCAAGACGTACGCGTACTTGACCCCCGATCTG
TGGAAGGAGATGCCTCTGGGCTCCACTCCTTACCAGGCATACTCGGACTT
CCTGTCCAAGCCCACTCCTCGTCTGCACGCCGATGCCGCGAGCTTTCTAG
ACCAT
FMO02959.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:43:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| RpS2-RC | 947 | CG5920-RC | 82..882 | 37..837 | 3975 | 99.8 | Plus |
| RpS2-RB | 1177 | CG5920-RB | 312..1112 | 37..837 | 3975 | 99.8 | Plus |
| RpS2-RA | 916 | CG5920-RA | 51..851 | 37..837 | 3975 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:43:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9896330..9897130 | 837..37 | 3975 | 99.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:43:10 has no hits.
FMO02959.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:45 Download gff for
FMO02959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| sop-RA | 72..876 | 37..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:03:03 Download gff for
FMO02959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS2-RA | 51..855 | 37..842 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:23:38 Download gff for
FMO02959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| RpS2-RA | 51..855 | 37..842 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:23:38 Download gff for
FMO02959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9896326..9897135 | 28..842 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:03:03 Download gff for
FMO02959.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9896326..9897135 | 28..842 | 98 | | Minus |
