FMO02974.5prime Sequence
851 bp (165 high quality bases) assembled on 2008-07-02
> FMO02974.5prime
ATACCTTATACGAAGTTATCAATCGACATGTCGATTTTTTCCGCCCGCCT
GGCGTCCTCGGTCGCCCGAAACCTGCCCAAGGGTGCCAACCAGGTCGCCT
GCAAAGCCGCTTATCCCGCCGCCAGTCTTGCTGCCCGCAAGCTCCATGTG
GCCAGCACGCAGCGTAGCGCTGAGATCTCCAACATCCTGGAGGAGCGCAT
CCTGGGCGTTTCCCCCAAGGCTGATCTGGAGGAAACCGGCGGTGTGCTGA
GCATCGATGACGGTATCGCCCGTGTCTACGGTCTGAACAACATCCAGGCC
GATGAGATGGTGGAGTTCTCCTCCGGACTGAAAGGCATGGCCCTTAACTT
GGAGACCGACAACGTCCGTGTTGGGGTCTTCGGTAACGATTAGCTGATCA
AGCAGGGCGATATCGTCTAGCGTACCGGTGCCATCATGAATATGACCGTC
GGTGATGAACTGCTGGGTCGCGTCGTCTATGCCCTGGGAAATGCGTTCGA
CGGCAAGGATGCCATCAACAACGATGACGGTTTTCGTGTGGGAATCAGAG
CACCCGGCATCATCCCCCGTGTGTCCGTGCGCGAGCCAATGCAGACCGGT
ATCAAGGCCGTCCACTCCCTGGTGCCCATCGGTCGTGGTCAGATGAGCTG
ATCATTGGCGATCGTCAGACTGGTCACACCGCTCTGGCCTTCGACACATG
ATCAATCAGACGCGCTTCTACGAGGCCCAGGACGATTCCAATAAGCTGTA
CTGCATCTACGTCGCCATTGGCCGAATCGTTCCACCGTCGCCCATATCAT
GAACGTCAGATCGAATCAGGACCATGGGCTACTCCGTGATTGTGCGGCCA
C
FMO02974.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| blw-RA | 2252 | CG3612-RA | 106..935 | 28..851 | 3250 | 93.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22799893..22800476 | 91..673 | 2420 | 94.7 | Plus |
| 2R | 25286936 | 2R | 22800573..22800743 | 678..844 | 415 | 88.3 | Plus |
| 2R | 25286936 | 2R | 22799204..22799271 | 28..95 | 310 | 97.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:51:54 has no hits.
FMO02974.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:17 Download gff for
FMO02974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blw-RA | 143..980 | 20..851 | 92 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:04 Download gff for
FMO02974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blw-RA | 98..935 | 20..851 | 92 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:23 Download gff for
FMO02974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| blw-RA | 98..935 | 20..851 | 92 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:23 Download gff for
FMO02974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22799196..22799269 | 20..93 | 91 | -> | Plus |
| 2R | 22799896..22800476 | 94..673 | 94 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:04 Download gff for
FMO02974.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18686701..18686774 | 20..93 | 91 | -> | Plus |
| arm_2R | 18687401..18687981 | 94..673 | 94 | -> | Plus |
