FMO02986.5prime Sequence
869 bp (869 high quality bases) assembled on 2008-07-02
> FMO02986.5prime
CTTCTCAGTGCAACTAAAGGGGGGTCTCGAGGGATCCATAACTTCGTATA
GCATACATTATACGAAGTTATCAGTCGACATGTCATCCTTCAAGGACAAA
GTGATTATTGTTACCGGCGCCAGCTCCGGCATCGGAGCAAGTGCCGCCGT
CCATTTGGCGAAACTCGGAGGGCTCCTGGTCATCGTGGGTCGCAACGAGG
AGAAGCTGAAGGAGACGGCCGACAACATTGTGGCGGCCGGAGGAGCAACG
CCATTGGAACTGCAGGCGGACATGACCAAGGAGGCGGAGGTGCAGCAGAT
TGTGGGCGCCACTCTGGCCAAGCACGGTCGCATCGATGTGCTCGTTAACA
ATGCGGGCATCCTGGAGACAGGCTCCATCGAAGCCACCAGCCTGGAGCAA
TTCGATCGTCTGATGAACACCAATGTGCGTTCCCTGTACCAACTAACCAT
GCTGGCCACTCCAGAGCTAGTCAAGACCAAGGGCAATATCGTAAACGTAT
CCAGTGTCTGTGGACTGCGTGCCTTTCCTGGTGTCCTGGCCTACAATGTG
TCTAAGGCAGCGGTGGACCAGTTCACGGCCTGCATAGCCCTGGAACTGGC
CCCCAAAGGAGTCCGCGTAAACGCCGTGAATCCCGGCGTGATTGTGACTG
ACATTCACAAGCGTGGCGGCATGGACGAGGAGACCTATGCCAAGTTCCTC
GAACACTGCAAGATAACCCACGCCTTGGGCCGTCCTGGCGATGTCAAGGA
GGTGGCTGCCGCCATTGCCTTCCTGGCCAGCGATCAGGCCAGCTTCACCA
CGGGAATCAGTCTGCCCGTCGATGGAGGTCGTCACGCCATGTGCCCGCGA
GCAAGCTATTCTAGACCAT
FMO02986.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:15:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31549-RB | 991 | CG31549-RB | 66..836 | 80..850 | 3855 | 100 | Plus |
| CG31549-RA | 1130 | CG31549-RA | 205..975 | 80..850 | 3855 | 100 | Plus |
| CG12171-RA | 1014 | CG12171-RA | 75..832 | 89..846 | 970 | 75.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:14:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5632396..5633166 | 80..850 | 3855 | 100 | Plus |
| 3R | 32079331 | 3R | 5633701..5634458 | 89..846 | 970 | 75.2 | Plus |
| 3R | 32079331 | 3R | 5634825..5635142 | 796..479 | 390 | 74.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:14:59 has no hits.
FMO02986.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:00:53 Download gff for
FMO02986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31549-RA | 196..975 | 72..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:45:56 Download gff for
FMO02986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31549-RA | 196..975 | 72..850 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:04:03 Download gff for
FMO02986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31549-RA | 196..975 | 72..850 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:04:03 Download gff for
FMO02986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5632387..5633166 | 72..850 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:45:56 Download gff for
FMO02986.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1458109..1458888 | 72..850 | 99 | | Plus |
