Clone FMO02989 Report

Search the DGRC for FMO02989

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:29
Well:89
Vector:pMK33-CFH-BD
Associated Gene/TranscriptTwdlT-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO02989.5prime Sequence

413 bp (413 high quality bases) assembled on 2008-07-02

> FMO02989.5prime
ATAGCACCCCTAATACCAAGTTATCAGTCGACATGAAAGCCTTCATCCTA
ATGTCCTGCCTGGCGCTGGCCGCCGCTCGTCCTGAAGCCGGATACAACTA
CAACCGTCCTGGTGGCGGCGGTGGCTCTGGCGGCGGCTCCGGCGGTGGCC
TGGGCGGTGGATTCGGAGGTGGCTCCAGCGGCGGCTTCGGCGGCGGTATT
GGTGGAGGATTCGGTGGTGGATTCGGCGGTGGCAGCGGCGGAGGAGGATT
CAGCAGCGGCGGAGGCGGTGGCTTCAGCAGCGGCGGTGGTGGAGGCGGAG
GCGGTGGATTCGGCGGTGGATTCGGAGGCGGCTCCGGCGGCGGCTCCGGC
GGCGGTTTCGGCGGAGGTGGCAGCATTGGCGGATTCGGAGGCGGCGGCGG
TGGTGGTGGTGGC

FMO02989.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:26:33
Subject Length Description Subject Range Query Range Score Percent Strand
TwdlT-RA 1607 CG5812-RA 190..571 32..413 1910 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:26:31
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 27049511..27049848 32..369 1690 100 Plus
Blast to na_te.dros performed on 2014-11-28 20:26:32 has no hits.

FMO02989.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:55 Download gff for FMO02989.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlT-RA 180..566 24..413 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:41:24 Download gff for FMO02989.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlT-RA 185..571 24..413 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:01:22 Download gff for FMO02989.5prime
Subject Subject Range Query Range Percent Splice Strand
TwdlT-RA 185..571 24..413 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:01:22 Download gff for FMO02989.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 27049506..27049845 24..366 99 -> Plus
3R 27049922..27049968 367..413 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:41:24 Download gff for FMO02989.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 22875228..22875567 24..366 99 -> Plus
arm_3R 22875644..22875690 367..413 100   Plus