FMO02994.5prime Sequence
913 bp (434 high quality bases) assembled on 2008-07-02
> FMO02994.5prime
TTCGTATAGCATACTTAATACCAAGTTATCAGTCGACATGGAGCACGATG
ACTCCAGCACCAGTGGCACTGGCAGCCATACAGCCAGCAATACCAGTCTA
GTTCCCGCCTCGCTGAAGCGTCGTGGCCACCTTCATCATCCGCGATTCTC
GGGCACTCGCCGTCCCAATGTGCCCAATGTCCAGGAGATTCTGGCCGCAC
TCTATCGTGGCGACTCAAAGAGCGCCCTGTCCAATCTGAGAGGAGAGACG
CAACCGGAGGAGGAGCAACCACAGCAGCAGACGGAGGAGGTGCTGCCACC
CAGCAGAAGCACTTTATGCCTGCCCCTCAGTGAATCGGTGACCAATTCCC
TGGGCAGCAACAGTCCCACGCCCACAGACGAAAGCAGCGTGCAAGATGAG
GGGGCCAGTAATCCGGCAGCAGCTTTAATAGCTGAGGATGCAGCCCCACC
AGCAGGCACAACCACGTCCAATAGCAAGAAAAAGAAGCGGGAGAAGGGTG
AAAGGTCAGAGAAATCGGACAAATCTGAGAAATCCGACCGGAAGAAGAAA
TCTTCAGGCAAGAAGGAACGCAGCAAACGATCCAATCCCATGGAGCAAAG
CAGCGACAGCCTGGCCACCGATCTCAGTGCCGGGGCCATCGATGAGGGCA
TCGCACTGGCCGACGACGATGACAACCAAGCGGCGGAATGGTCCAAGTTG
CGATGCACCAGCGAGGCGGCCGAGATTGTGGCGGAGCGGGAGGCTCGACT
GAACAAGGGACGTTGTGCGGATTATCCCGGACTCGTCTTTTGGCATATCC
ATCTTCAGTTCGGACACCATGATGAATTTCATCATCATCCGCAACGAGCT
GCACAACATCATGATCACACATACTCAAACGGGCCGAATCCGAGGTTGCC
GCTCTGAACCGTC
FMO02994.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:59:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tm1-RH | 3054 | CG4898-RH | 985..1862 | 34..913 | 4185 | 98.5 | Plus |
| Tm1-RC | 2651 | CG4898-RC | 582..1459 | 34..913 | 4185 | 98.5 | Plus |
| Tm1-RI | 2501 | CG4898-RI | 432..1309 | 34..913 | 4185 | 98.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 15288593..15289440 | 34..883 | 3985 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:59:36 has no hits.
FMO02994.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-02 17:01:52 Download gff for
FMO02994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tm1-RC | 1595..2472 | 34..913 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:11:57 Download gff for
FMO02994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tm1-RI | 432..1309 | 34..913 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:30 Download gff for
FMO02994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tm1-RI | 432..1309 | 34..913 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:30 Download gff for
FMO02994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 15288593..15289439 | 34..882 | 98 | -> | Plus |
| 3R | 15295113..15295143 | 883..913 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:11:57 Download gff for
FMO02994.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 11114315..11115161 | 34..882 | 98 | -> | Plus |
| arm_3R | 11120835..11120865 | 883..913 | 100 | | Plus |
