FMO03013.5prime Sequence
1249 bp (1030 high quality bases) assembled on 2008-07-09
> FMO03013.5prime
TCGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCCATAGACCT
CCTGATCCTGGCCCTGCTGCTCGTCTCGTTCCTGATCAACCTGCTGGCGC
TGTGTGCCTTTTGGATAACGCCTGGCTTGAGGACCACCGCCAATCGCTTT
ACGATCAACCTGCTGGCCATCAATCTCATTGGTTGCTGCATCTTGGCCCC
CACTTTGTTCCTGGGACTGCCGGGAAAGTCTGCGGAGGCATCCACTTCCA
ACGCCGAGACCCTGGAGTTCTTCTCGAAGCCGGGAAACCATCAGGTGATA
CTTCGTCGCAATGGCCAGCTGGTGGAACAGGACGGCGTGGTGGTGCGAAG
GAACATCAGCGAAAACGGCGATACGGTGGAGACCTTCTTCAAGTGCAATG
CCACCTACTGTCGCGAGTTGACCATCGATGAGCGCGGAGATGGTGGCTTT
GTCATCACGGAAACCGAGACACACGAAGAGAATCTCTCGGCCTTTGAGAG
CTTACCCACGGAGGCTCCCATTTTGCCGCCCGTCCAACTGAGATGTTGGT
CCATAGACATGACTGCTGCGCTGGGAGCTCTGGCAGTACTGCTCGTGGTG
GGGGACACCTGGTGTGCCGTTACGGATCCCCTGCGCTACCACAGTCGCAT
TTCGGGCGTGAAAACCTGGATCTTCATAGCACTCACCTGGGTGGTGGGCA
TACTCTTTGGAGCCCTTTCCGCCTTCCGAGTTTTGGACTTTGAGGCGGAC
GCCCTGTTCAGCAGACAACGCCGCCTGGCAGTCACGTACTTCAACATCAG
CAGCACCAATAGTATTTTCGGAGTGGTGTACGCCAGTGTCTACTTCATCG
TGATCATCCTCCTGCCCTTCGGCTTCGTGTGCGAATGTACTGAGGATTAT
TCAGTGAGGCGCGCGGAAACGGGCTGCGCATGCCGCCAGATGGCTCTTCG
CCGCTGCTGCAGAGCGCCTTTGAATCTGACGGCTGGGCAGCAGGCGGCTC
AAGCCAACCCAGTTCCTCAATAGCCTTGGTGTGTTCATCGGGCATTTCCA
TATCCCTCGGCCAGTTCGCATGGCGGCCAACAGCAGCCTTGGGGCTTTGG
GCGGTCCTGCAAATGCAAATTGAATCCAGCGCCAACAGCGGAGGAATTCG
CCCAAGTTGTCTTCCGTCGGAACTCGGCACGAAGTACCTTGCCACCAATC
CTCGGAAGATATGGTGACTCAAATGCCGAGAAAGTGTAAGACACGCGAG
FMO03013.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:43:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12290-RB | 4453 | CG12290-RB | 458..1584 | 37..1178 | 5095 | 97.6 | Plus |
| CG12290-RA | 3082 | CG12290-RA | 458..1584 | 37..1178 | 5095 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:42:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 26230705..26231831 | 37..1178 | 4695 | 96.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 19:42:59 has no hits.
FMO03013.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:32 Download gff for
FMO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12290-RA | 452..1593 | 34..1190 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:47:52 Download gff for
FMO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12290-RA | 456..1597 | 34..1190 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:18 Download gff for
FMO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12290-RA | 456..1597 | 34..1190 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:18 Download gff for
FMO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 26230697..26231844 | 24..1190 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:47:52 Download gff for
FMO03013.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 22056419..22057566 | 24..1190 | 96 | | Plus |
