FMO03019.5prime Sequence
1244 bp (954 high quality bases) assembled on 2008-07-09
> FMO03019.5prime
CGTATAGCATACATTATACGAAGTTATCAGTCGACATGGCTTCGATTAGC
TTGCTGAACCCCAAGGCCGAGTTTGCCCGCGCCGCCCAGGCTCTGGCCAT
CAATATCAGTGCCGCCAAGGGACTGCAGGATGTGATGCGCACCAATTTGG
GACCCAAGGGCACCGTTAAGATGTTGGTTTCTGGCGCCGGCGACATCAAG
ATCACCAAGGATGGCAATGTCCTGCTGCACGAAATGCAGATCCAACATCC
GACTGCCTCTATGATTGCCAGGGCCAGCACGGCCCAGGATGATTCCACCG
GCGATGGAACCACCACCACTGTGATGCTTATTGGCGAGCTCCTGAAGCAG
GCCGATATCTATCTGTCCGAGGGACTGCATCCTCGCATCATGACCGATGG
ATTCGAGAAGGCACGCGACAAGGCATTGGAGGTGCTCGACCAGGTCAAGG
TGCCCGTGGAGATCAACAAGAAGAACCTGGTGGAGGTGGCCAACACAAGT
CTGAAGACCAAGGTGCATCCCGCCCTTGCCGATCTGCTTACGGACGTCTG
CGTGAATGCCGTGCTGACCATTGCCAGTGCCGATAAGACCAAGCCCGTGG
ACCTCCACATGGTGGAGCTGATGGAGATGCAGCACAAATCCGATACCGAT
ACACAGCTGGTGCGTGGACTAGTCATGGACCATGGTGCTCGCCACCCGGA
CATGCCGAAGCGTTTGGAGAATGCCTACATCCTTACGGCCAATGTCTCGC
TGGAGTACGAGAAGGCCGAGGTCAACTCTGGCTTCTTCTACAAGACCGCC
GAGGAGCGTGAGGCCTTTGTGCGCGCCGAGCGCGAATTCATCGACCAGCG
TGTGAAGAAAGTGATCGAATTGAAGCGCTCCGTGTGCGATGGCAACCCAA
AAAATCTTCGTTCTGATCAACCGGAAGGGCATCGACCCCATCTTCGCTGG
ACGCCCTACCAAGGAGGGCAGTCCTGGCCTTGCGTCGCGCGAGCCGCCGC
TGTGAAGCCGTCTGTCTTTGGGCCTGGCGTGGCACTGCAATGACCTCCTT
TGACGATTCTGCAGGAGGAGCACTTGGGATTACGCCGGTGTTGGGTGTTA
ACGAGCAATGTTTCTTGGGCGAGAAACAAGTAAACCTTTCCGGTGGAAGA
CTGCAGAGATGGCTGTCTGGTACAGGAATTCTGATCAGTTCCCACAGTAC
AGATAACCGATCAGAGAAGCCTTAGTAAGGGTTCCTCGCGCTGT
FMO03019.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tcp-1zeta-RA | 1924 | CG8231-RA | 124..1228 | 36..1155 | 4845 | 96.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15747308..15748222 | 173..1091 | 3905 | 97.2 | Plus |
| X | 23542271 | X | 15746771..15746909 | 36..174 | 695 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:52:40 has no hits.
FMO03019.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:04:41 Download gff for
FMO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tcp-1zeta-RA | 142..1215 | 32..1115 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:35 Download gff for
FMO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tcp-1zeta-RA | 120..1193 | 32..1115 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:54 Download gff for
FMO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tcp-1zeta-RA | 120..1193 | 32..1115 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:54 Download gff for
FMO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15746767..15746907 | 32..172 | 98 | -> | Plus |
| X | 15747308..15748220 | 173..1091 | 96 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:35 Download gff for
FMO03019.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15640800..15640940 | 32..172 | 98 | -> | Plus |
| arm_X | 15641341..15642253 | 173..1091 | 96 | -> | Plus |
