FMO03028.5prime Sequence
1239 bp (1055 high quality bases) assembled on 2008-07-09
> FMO03028.5prime
CGTATAGCATACCTTATACGAAGTTATCAGTCGACATGGGAACCTTGGGC
AATCAGTTCATCCTCTCGCGGGAGCGTCGCCGGTTCGGGAGGCAGTGCCT
CTTCACAGACCGCAACGAGATGATCCTCAGTGTGCAGCCGAGTGGACGGT
TGCGCCTCAAGTACATACTGCGCAATCCGATCAACGAACGGACCCAGCTG
AGCGAACAGTATGCAGCATCTTCAGTGTTGACACACAACGTGACCCTGGA
TTCCCATGGCTTGAATCACTACGAAGGCGGCTGGAACGTCAAGGAGGTGA
ACATTATGGACGAGGAGTCCACAATGCGCTATCGCAAAAAAGTCGAGCGT
GATGACTCCTGGGGCATCGAGGTGAACCAATTGATGCACGCCGCAATGGA
CATCAGTTCGGCCAACAATGCTGTCAACATCTACGAGGACTTCTTTGTGG
ATCTACCGGAGGATTTGGGCCGCGGCATCAGCATGAAGATCGCTGCCAGG
GGTACCCATGTCTTTCATGATCTGTGGATCCCATCGCGTAGGCTGATGAC
GTGCGAATGGCTAAACAACGATCCCAATCAGTTTCTCCTGTTCTATTCCA
ATCGAATGAGCCTGACACCGGACTACACAAAACAGCTAAACACGCTGCCC
GATTTTGGCAACGATAATCCGCATGCATTCTACATTTGGAACTTGGATGA
TGCCACCCGACCGGCTGCCCATTACGATTCTAGGAGAGTCGTACGGGTTG
CCAAGGTGTGCCTGCGGGATGAGAGCTACATGGTGGGTGGACTACAGGAG
GGTCAGGTCGGCTTCTGGCTAACCGAGAACCAGGGTGGTCCCAAGAGCAT
GTGTCCCCTGGAGGCGTGTCATCGCGAGGCCACCAACGGCCATCTGCTGG
GTGCACTCGAGACTCAACACTGAGTTTTACTCAGATCACTGGATGGGTTC
ATCAAGTACTGGGATACCCGGGATTCTTCTAATGCCGGTTCATGAAGTGC
TGCCGAACCGGACCCTAGGACAGTTCAAATCGCCAGATGCACATGGCGTA
CTTTTTCTCGAGTTCGAGTACACCATACCATGCGCTTTCAATATTCTGCA
CCCGAATATGGTACTTGTCGTAAGCCAATTCGCAAGGGCACCCATCCGCA
AGAATACATATCGTTGCTGCACTAACCTTTGCCCGTTCCATTTCCGTTTG
TATAATGCGTAACTCCCGTCTCCTGTTAAGAAGGAAACT
FMO03028.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10859-RB | 1989 | CG10859-RB | 24..1156 | 36..1170 | 5080 | 97.3 | Plus |
| CG10859-RA | 2209 | CG10859-RA | 244..1376 | 36..1170 | 5080 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13397375..13398421 | 1080..36 | 4810 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:48:16 has no hits.
FMO03028.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:34 Download gff for
FMO03028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1387 | 36..1180 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:50 Download gff for
FMO03028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1387 | 36..1180 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:31 Download gff for
FMO03028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10859-RA | 244..1387 | 36..1180 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:31 Download gff for
FMO03028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13397278..13398421 | 36..1180 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:50 Download gff for
FMO03028.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13397278..13398421 | 36..1180 | 96 | | Minus |
