FMO03029.5prime Sequence
862 bp (120 high quality bases) assembled on 2008-07-09
> FMO03029.5prime
CGTATAGCATACATAAAACGAAGTTATCAATCGACAAGTCCTCATCCGAT
GGAAAACTTCATTACCATGGCCGTGTGGCGGTGGTGACGGGAGCTGGTGC
CGGTTTGGGCCGCGAGTACCCCCTGCTCTTCCCGGAACGTGGCGCCCAGG
CGGGGGTCAACGATCTGGGTGGCACCCTCTCGGGCGACGGAGCATCGCAA
TGGGCCTCCGACATTGTGGTGGATGAAATCCGTAAGGCCGGCCGCGAGGC
TGTGGCCGACAACAACTCGGTAATCAATGGGGCAAAGGCCATCTAGACGG
TCACCCAAGTTTTCGGACGCGTCGATATCCTGGTCAACAATGCCGGCATT
CTGCGCGACAGGAGTCTGGTGAAGACCACCGAACAGGACTGGAATCTGTT
CAACGATGTCCATCTGAAGGGCAGCTTTAAATGCACCCAGGCGGCATTCC
CGTACCTGACCAATCCGAACTATGGCCGCATCGTCATGACATCGTCCAAC
TCGGGCGTCTATGGTAATTTCGGGCAGGTCAACTACGCTGCCGCCGAGAT
GGGCCTCATCGGATTGGCCAAAACGGTTGCCCATCGAGGGAGCCCCGCAA
CAATGTTCTTTGCAACGTCATCTAGCCAACTGCCGCCCGTCGAATGACAG
TAGACATTCTGCCCGACATTCTCTTCAACCAGCTGAAACCCAATCTGATT
GCTCCCGTAATGGCCTACTTGTGCCACGAGTCCTGCGAGGATATGATAGC
TATATCGAGAGGAGCGCCGGATGGGCCACCTACCTGTACTTGGTTTCGCG
GAAGGGGTGCTGTGCTGCGTCCTTCGCTGGACAGACACCGTGACCATGGA
GGAATTTAGGGA
FMO03029.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:39:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Mfe2-RB | 2116 | CG3415-RB | 119..929 | 38..851 | 2975 | 91.4 | Plus |
| Mfe2-RA | 2225 | CG3415-RA | 228..1038 | 38..851 | 2975 | 91.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:39:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 16271522..16272225 | 38..743 | 2665 | 92.5 | Plus |
| X | 23542271 | X | 16272526..16272628 | 747..851 | 230 | 85.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:39:01 has no hits.
FMO03029.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2010-07-30 09:27:08 Download gff for
FMO03029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3415-RA | 202..1015 | 35..851 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:54:19 Download gff for
FMO03029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mfe2-RA | 225..1038 | 35..851 | 91 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:13:35 Download gff for
FMO03029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Mfe2-RA | 225..1038 | 35..851 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:13:35 Download gff for
FMO03029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 16271513..16272232 | 25..749 | 91 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:54:19 Download gff for
FMO03029.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 16165546..16166265 | 25..749 | 91 | -> | Plus |
