FMO03033.5prime Sequence
1251 bp (802 high quality bases) assembled on 2008-07-09
> FMO03033.5prime
AGCATACATTAAACGAAGTTATCAGTCGACATGACACCTAAGTCGATCCA
AGATGACACCTATGTGGAGCAGTTCATGAAGTACAACCTAAATGTCATGC
ACCAAATGACTAACTTCACTACAATGGTAGCGAAGAGCACGACCAGATCC
CGCACGCGGTCTAGTGTTCGGGCCGGAATAGGCGGCAATAAGCAGTCCAT
TGACGACCTGATGAACGGGATACTTTATGAAACTATTAACTGGGAACCGT
ACAGCACTGTTGAGGCTCTCGAAGAGGCGTACGAGCCAAAGCCGTATACC
AAGTCCTTTTTAAAGATCACCTTACGCAAGTCTGACTTCTTCGAAATTCA
CAGCCAGACGCAGACGACGGTGGCCAAGGGATCGCCCGAGGGCGACGATG
CGGAGCGAGACAACCGAAACTACGAGTATCTGACAATAGGGAAAGGCAAA
ATTCGCCGGCGCTCAGACAATGACGCTCAGACAGATACTCTGCTCTTCAC
CACTCGGGCAGTCAACACCATCCTCATAACCAAGGCCACCGTCAGCTCTT
ACGTTTCCAACTTTGAGATGTACGACACGCTGAACAATATCACCAAGGAG
TTCGCAACAGCCACTATGAGTTCGGTAAAGGACCTGACCCTCGGCTCTAG
CGCAGACGGAGGATGCGGATACCTTTGAGGACGACGAGGCCGTTGCCGAA
AAAGACAAGGTCAGCAGCCAGATAGAGCGCCTGTTCCGGAGCTCCCGAGT
TTCGCAACGCCATCATGTACATGGGCCGGCACGCTCTCGAGCAACACAAA
CGAGGCGGGGTTACGACGCTTCCGTAACTTTGACCAGGTGGAACGCTGGA
ACGCGGAGGCCGAGTACGTCTACTCGATGACCTTGCTCCTTTCGGCTGGT
ACCGGAGCCCAGCAAACGACGAGCGGCAGGCCGAATGCGTACTATTGATT
TTAGCCGCACAATGGTGGACATCCTGGCTGAAGCCTACGGACTGGTCGTC
ATTTTCCTCAAGCCAGGACGACCTCCGGCATCGTTTTCCTGGTGGGAGCA
TTTAAATTCAAGGCAAGCCGGATCGCGATACTACTACGATGGGTGCGGAT
AAGGGCAATAACTTCCTGCCGTTCTTGGCCATCTTGACTCGTATTGGTTC
TGTTCGAACGGTTACGTGAAAAATGCAATGGTGTACGTTGGCAGGTATAT
ATCCTTGTTGTGCGTCTCACTGTTACGAACTTCTCACCACAGGCTCCTCT
C
FMO03033.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:00:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dic61B-RB | 2642 | CG7051-RB | 459..1552 | 31..1133 | 4685 | 95.9 | Plus |
| Dic61B-RA | 2616 | CG7051-RA | 433..1526 | 31..1133 | 4685 | 95.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:59:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 150926..151791 | 1091..219 | 3385 | 95.1 | Minus |
| 3L | 28110227 | 3L | 151848..152036 | 219..31 | 945 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:59:59 has no hits.
FMO03033.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:00 Download gff for
FMO03033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7051-RA | 427..1314 | 25..916 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:12:11 Download gff for
FMO03033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 427..1314 | 25..916 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:46:43 Download gff for
FMO03033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Dic61B-RA | 427..1314 | 25..916 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:46:43 Download gff for
FMO03033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 151098..151790 | 220..916 | 99 | <- | Minus |
| 3L | 151848..152042 | 25..219 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:12:11 Download gff for
FMO03033.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 151098..151790 | 220..916 | 99 | <- | Minus |
| arm_3L | 151848..152042 | 25..219 | 98 | | Minus |
