FMO03040.5prime Sequence
1199 bp (938 high quality bases) assembled on 2008-07-09
> FMO03040.5prime
GTATAGCATACCTTATACGAAGTTATCAGTCGACATGACAGCCGAACGAG
GACCCCGCTCCCCGGGAACGGGGCAAAAACTAAGGCTTAGAGCCACTGAG
CCAATGCCACAGTGGACGGCCAAAAATCTGCACGCCCTGCTGGATCTGCC
CGCGGCGATGGAACTGCGCCAAATTGAGTTGATCTATCGGGCGGAGGGTA
ATGCAAATTTGGTGCTCGCCCTGCCGCAATTTAAAAAAGTTTTACGTTTG
CCAAAAATGATATCCAGCAGACTGCGCCAGGCGGCGCACCAGCGGCACGA
GCTGGCGGATGAGGTTGCTCGGCCGGAAGGGCAGCGTGTCTCATCCGAAA
GAGCTGGAACTGAAAATGCTGGCGACTTGACAATGCCGGATTTTATGGCT
TATATCGGGATAATGCGCCGTCTATTAGGAAATGAGTTTGTCTGCGGAGC
GGATATTGTTGCCATACCAAAGGAAGACGATAGATTCTGGATAAACGAGC
ATATACGCGCCCAAAGACCGGTTTCGCGTCTGGATAAGGAATTTGTGGGG
CCATTCGGCCTGCTGCTGCCAGATGTGACCCAATTGCCTGCCACGTTCGA
TGTTTTACTTGCCAATTTACAGGCAAAGGGCACAACAGGAGATGAAAGTG
GAGCTGCAGCGGGCGTAGGAGATGGCGGTGGCGTTGGCCGTGGAGCAGGA
ACAAGACGAAAAACAGGAGCGCTGTCCGTCGTCTGGGCGATACATATGCC
ATCGAAATAAAACCCAAACAAGGCTGGCTCAGTTGGCAAGTGATGTCAAC
GATTTATTTGATTTAATGCCATCGGGGGCAGTGACAAGCCCAAAGAGACG
ACCCTGCAATCAGGAGGAGAATGAGCCCTCTGCCCGGGACAAGTGCTGGT
GTCGCTTTTGCAGCATGCAACTGCTGAAGATGCACAATGGGAAAATCAAA
CGTTGAGCACTACTGTCCGCTGGATCTATTTTTCGGGTACACCCAATCGA
AGGCTCGATGCCCTGATGCACTTCTCGCCTTGCCGCAAAAAATTTACGTG
AGTTCGAACAGCATTTAATTTATGCGATTCACGCGATTCGATTCCTCATG
AAATGGACTCGCGGTCTTCCAGTGAATAAGTGCTTAAAACATGCTGGGCC
TGTCTGCTAGAAATCACAGAGAGACCTCGGTATCTCACATAATAGAACT
FMO03040.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:48:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ipk1-RC | 2633 | CG30295-RC | 467..1616 | 34..1159 | 4825 | 96 | Plus |
| Ipk1-RB | 2636 | CG30295-RB | 467..1616 | 34..1159 | 4825 | 96 | Plus |
| Ipk1-RA | 2472 | CG30295-RA | 467..1616 | 34..1159 | 4825 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:48:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20871671..20872005 | 34..368 | 1675 | 100 | Plus |
| 2R | 25286936 | 2R | 20875231..20875546 | 616..929 | 1340 | 97.8 | Plus |
| 2R | 25286936 | 2R | 20872539..20872692 | 368..521 | 770 | 100 | Plus |
| 2R | 25286936 | 2R | 20873650..20873752 | 521..623 | 515 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 22:48:30 has no hits.
FMO03040.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:37 Download gff for
FMO03040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipk1-RB | 447..1452 | 27..1030 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:04:54 Download gff for
FMO03040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipk1-RA | 462..1467 | 27..1030 | 98 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:26:37 Download gff for
FMO03040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ipk1-RA | 462..1467 | 27..1030 | 98 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:26:37 Download gff for
FMO03040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20871666..20872005 | 27..368 | 99 | -> | Plus |
| 2R | 20872540..20872692 | 369..521 | 100 | -> | Plus |
| 2R | 20873651..20873751 | 522..622 | 100 | -> | Plus |
| 2R | 20875238..20875546 | 623..929 | 98 | -> | Plus |
| 2R | 20875605..20875663 | 930..986 | 93 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:04:54 Download gff for
FMO03040.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16759171..16759510 | 27..368 | 99 | -> | Plus |
| arm_2R | 16760045..16760197 | 369..521 | 100 | -> | Plus |
| arm_2R | 16761156..16761256 | 522..622 | 100 | -> | Plus |
| arm_2R | 16762743..16763051 | 623..929 | 98 | -> | Plus |
| arm_2R | 16763110..16763168 | 930..986 | 93 | -> | Plus |
