FMO03052.5prime Sequence
506 bp (506 high quality bases) assembled on 2008-07-09
> FMO03052.5prime
GTATAGCATACATTATACGAAGTTATCAGTCGACATGGGAAAAGTTCGAA
AAGTAAAAACACGGACGCCATCCGGCGTGGACACCTCGGCGGAAATCGAT
GTGGAATCAGCGGGCGAAGCGGAGGGCTGCGGACCCATCGAGGCGATTTG
CGTTCACCTGCAGCAGGCGAACGTGGAGGAGAAGCTGAACGGACTGCACT
CATTCGCCGTGCTGGCGCTGCGAAAGGAGAAGGTTCCCGAAATACGCGAC
AGCGAGTTGGTCCGGATTGCGGCCCCCCTGCTGTGCGATAAGGAGAGCGC
CATCCGGAATGCGGCGGCCGGTGCCTTTCGGAATTTGTCGGTGTTTGGCA
CGGAGGTGTGCGACTTCCTCGTTGAGAACGACATACTGACCGCCCTGCTG
ACTCTGGTCCGTAGCTATGATCTGACAAAAGGTGGATTCGAAAACGAGCT
GCATGCGGACACCTTCCAGCAAGCAATCCATCTGCTCCGAAATCTGTGCG
AGAGCT
FMO03052.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:27:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10286-RA | 2151 | CG10286-RA | 53..524 | 35..506 | 2360 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:27:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6369017..6369488 | 35..506 | 2360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 20:27:46 has no hits.
FMO03052.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:06:43 Download gff for
FMO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 64..535 | 35..506 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:22 Download gff for
FMO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..524 | 35..506 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 21:02:11 Download gff for
FMO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10286-RA | 53..524 | 35..506 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 21:02:11 Download gff for
FMO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6369004..6369488 | 17..506 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:22 Download gff for
FMO03052.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2194726..2195210 | 17..506 | 97 | | Plus |
