FMO03058.5prime Sequence
1254 bp (953 high quality bases) assembled on 2008-07-09
> FMO03058.5prime
TCGTATAGCATACATAAAACGAAGTTATCAGTCGACATGGCCTCGAAGGT
GCATCCAAGTCCGGGGGCGGCGCGCAGTGTGTGGGCGTTGCCCCTAACCG
CCTCCTCCTCCTGCAACATGGTCGTCGCGGAGGAGGATGGCCATGCCCAC
GCCGACGACATCCATTTGGATCATCGACCGCATTCGCCGCCATTAACGGG
TCGCGGCACGGACGGTGGACACGGCAGTAGCGGCGTCGAGGACCACGAAA
ATGTGCTCCTCTTTGAGGGGCTCGATGGTGCCACCACCGTGAGTTTGGAC
GACATCTTCGATATTATCAAGAACGGAGAGGTCAGCGAGGTGGAGAATCT
CGTGGACAAGTTCGGCATGGAGTGTCTGTCGGCCAGGGATCGTCATGGCT
ACACGCCAGCCCACTGGATAGCTCTCAACGGCAATGTCCAGCTGATGCGA
TACCTCATCGAACGCACGGCTCCGATCGATCTGCCCTGTTTGGGTACGCA
GGGTCCACGGCCCATTCACTGGGCGTGCAGGAAGGGTCATGCGTCCGTGG
TGCAGGTCCTCCTCCAGGCTGGAGTTGCCGTCAATGCGGCGGACTTCAAG
GGACTTACACCCCTCCATCTCGCCTGCATGTACGGCCGTACTGCAACGGC
GGCCTATCTTCTTGGAATGGGAGCGCTGAACAACCTAACTGACATAAACG
GCGATACGGCACTCCACTGGGCAGCGTACAGGGACATGCCGATCTTATGC
GACTCCTCATGTATTCCGGCGTTGAGCTTCAAAAGACGGACAACTTTGGA
TCGACTCCACTGCATCTGGCTTGCCTGTCTGGTAACATGACGTGCGTTCG
CCTGCTGTGCGAGAAGTCCCAGCTGGATCTGGGAACCGAGGGACAAGAAT
GGAAAGACGCCGATCATGTTGGCACCATGCTCATCAGCAACCAGGCATGT
GTTGCGCCTGCTGTACGGCGAGGTGAAGAGAAGTCCCGTTGGATTCCCTC
AGTCCTCGGAAAGTTGGGGCTGGCTCTTTGGCGGACCTGGAAGACTCCAA
GGACCGCCTGATTCCAATCCCCTCCCTGTGGCTACCTTTGGGGCTTATCC
CATGGTACATGATCCGTGCCGAATCCCAATTACGGCTAAACTATTTGAAA
CCCCTCCCATATTGCATTATATACTGGAACGCCGTAATGTGATAGCCTGG
CCCATTGCCATACGCCGGAATCTCCGGGTATATATCACCATCTATCTCTA
GAAG
FMO03058.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:15:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Patsas-RA | 2466 | CG6618-RA | 224..1417 | 35..1238 | 5095 | 96 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 20:15:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12102049..12103062 | 1052..35 | 4655 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 20:15:10 has no hits.
FMO03058.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:00:33 Download gff for
FMO03058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Patsas-RB | 191..1191 | 32..1035 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 23:42:10 Download gff for
FMO03058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Patsas-RA | 221..1221 | 32..1035 | 99 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 20:59:22 Download gff for
FMO03058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Patsas-RA | 221..1221 | 32..1035 | 99 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 20:59:22 Download gff for
FMO03058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12102065..12103065 | 32..1035 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 23:42:10 Download gff for
FMO03058.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12102065..12103065 | 32..1035 | 99 | | Minus |
