Clone FMO03063 Report

Search the DGRC for FMO03063

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:30
Well:63
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG10824-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO03063.5prime Sequence

622 bp (173 high quality bases) assembled on 2008-07-09

> FMO03063.5prime
TATAGCATACATTATACGAAGTTATCAGTCGACATGTACGTCCGGAATTG
TCTGCCGTTCCTCTGCAGCTATTTGCTGATCTCATTGGCGGCCACAGCTA
CTACGGATGAGGACGCGGATGCTGATGTGGATAGTGGCTCATCCCGAATA
GTGCTGGGTCTCCAGCTTGGAAGGTCATTGCCAGACGGAGGGCAAGGTGA
CCCAGCTGCAGGGGTTTTGAGTTTGCGGGAAAAGGACGAAAAAGGCCCCT
TTTGATCTGCCCACGGAGGGGGGGATGCCCAAGGATGGCCCCCCCCTCCA
AAGTGGGGGAAAAAGGAGCCCCCCCCAACCCTGGTTTTTCAAAAACGGCC
CCTTCCCCAATTTTTCCCTTGGCCTTTTTTTCCCCCCTAAAGGCCTGGGG
TGGGAATGCCCGGGTGGGGCTCCCCTTTTTTTTATGGGGGAAAAACTCCC
CCTGGGGGGGAAAAAGGGGGGTTTTTCGCCCCCCAAAAACCCCCTAAAGG
GGGCCCCCCAAAACCCTTGGGGGGGGGAAAAAGGGGTTTTTTTTTTAAAA
AAAAAAAAAAAAAAAGGGGGGGGGGGGGGTAAAACCCCCAAAAAAAAACG
CGCACACTGAAAAACCCGGGGG

FMO03063.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG10824-RA 1855 CG10824-RA 39..367 34..369 1055 89 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:08
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 21160803..21161054 289..34 915 94.1 Minus
Blast to na_te.dros performed on 2014-11-28 18:52:09 has no hits.

FMO03063.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:00:36 Download gff for FMO03063.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10824-RA 40..291 34..289 94   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:24:13 Download gff for FMO03063.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10824-RA 39..290 34..289 94   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:39:33 Download gff for FMO03063.5prime
Subject Subject Range Query Range Percent Splice Strand
CG10824-RA 39..290 34..289 94   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:39:33 Download gff for FMO03063.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 21160860..21161054 34..230 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:24:13 Download gff for FMO03063.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 16986582..16986776 34..230 98   Minus