FMO03064.5prime Sequence
1270 bp (987 high quality bases) assembled on 2008-07-09
> FMO03064.5prime
TAGCATACATTATACGAAGTTATCAGTCGACATGCAGAAGTCGCCCAGGA
TGAGCCGCCTGTCGGCCGAAAAAAAGAAAAAGAAAGACGATGAAAAGAAG
GACAATGCGGAGGAAGAGTTGCAGAAGAACAAGGAGCTAAAGTGCGTGAG
CAACTACGACAAGACCGAGATACTCGACTATATGCCCCGATATATGGATA
CCTTCTGGAAAATGGACACGCGGCTGAGCGGATCCAAGGTGGATGGTCTA
TGGATGCTCAACCAGTCCAACTACAACAAGGGACTGGCCTTCACACTGAA
CGAAAGGCGAGTGCTATCCATTCACGGACTACTTCCGGTGGCAGTGCGAA
CTATAGATGAACAGGCGGAGATCTGCAGTAATCTCCTCGAGTCATTTACC
AATAACGTGCAACAGTATATATATCTGACATATCTGTCTCGTCGAAATAG
GCGATTATTCTACTACCTTTTGCTGTCCAATCCCGATCGCTTTGTACCCA
TGACGGATGCCTCGGGCTCGATAGATCTGCTAATGGTCCACAGGATGATC
CATTCGATGGGCCAGGGTCTTTACATTTGCATTAAGGATCTGGGGCACGT
TTCGCAAATCCTGTCTAATTGGCCATTCCGTTGCGTTCGCTGCCTGCTGG
TGAGCAATGGTGCCTCTGTTCTGAGTGTGGGTGACTTGGGTGTCGACGAG
ATGCCCATACTGTTCTCCAACTTGCATCAGAATGTCGTCTATGGCGGCAT
TCATCCGGCTTATTGCTTGGCCGTAATGCTGGATGTGGGTACAAATAATG
AGGAACTGTTGAACGATCCGATGTATACGGGCCTGCGGGAGCGCCGTTGC
TCAGAAAAACTGTACGACCAGCTGTTCGAGGAATTCACACTGTCCGTGAT
GCAGCAGTATAGACCAACGTGCCCTGATCCTGTGCAAGGACTTTGAGGCC
CAGAAGGCCCAGAAGCAATTGGAGCTGTACCGCCGAACGCCAGTGCATGG
TCGACGTGGCACTTTCGTGCCTCCCCTGCAGTTGCCTCTGGCCGGTGGTG
ATAAGTGTGGCCACCGATGGAAAGAAGCTCTTCTTCCCCCTCCCCCCGTA
TATCCCGGTTCTACCGCGCCGCCCGAGCCATTAACCATTGGCCAAGGGCT
CGAATTGGGTAATGGTTCCCTGCCTGAACCGGGTAGGGCTTCCCTTCGAT
TCATGCCAAGGGGAAGATTGGTCTCCTCCAGATGCCGATGGAATGTGGGA
AGACCTGTGGGTGGAGTACG
FMO03064.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 22:37:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7848-RA | 2103 | CG7848-RA | 157..1252 | 31..1142 | 4880 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 22:37:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16434822..16435798 | 1009..31 | 4735 | 99.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 22:37:24 has no hits.
FMO03064.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed 2008-07-09 15:02:10 Download gff for
FMO03064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7848-RA | 157..1158 | 31..1035 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-05 01:01:04 Download gff for
FMO03064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7848-RA | 157..1158 | 31..1035 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 23:20:18 Download gff for
FMO03064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7848-RA | 157..1158 | 31..1035 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 23:20:18 Download gff for
FMO03064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16434797..16435798 | 31..1035 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-05 01:01:04 Download gff for
FMO03064.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12322302..12323303 | 31..1035 | 98 | | Minus |
