FMO03067.5prime Sequence
1285 bp (492 high quality bases) assembled on 2008-07-09
> FMO03067.5prime
CGTATAGCATACATAAAACAAAGTTATCAATCGACATGGAAGCGGTGGCA
AAGAAGGGCATGGAGAACTACAGATTTGGCAGTGTGGACTATGCCGTTTT
CCTGGGCATGATCGTATTATCCACCACCTCTGGCATCTATTTCGGGTGCA
TCAAGAATATCAAGGTGAAGCTCGAGGAGGCGGAACCCACTCTGCCGACG
ACCACTCCAAAGAGGCTGAAACTCCATTTCGGATCGGAGAAGATGAGCGA
GTATCTGCTAGGGTCCCGCAATCTGAAAGTTTTCCCCGTTGCCATGAGCC
TGATAGCCAGCTATATATCGGGCGTTACCATACTGGGCACAACCTCTGAG
ATCTACAATTATGGCACGCAATATTGGTTTATAACCATAGCATTAATGCT
CCAAGGTATTGCCGTCTCCTACCTCAACATACCCTTGTTCTCGGATCTTC
AAGAAGGCTCTTCCTATGATTACTTGGAGATGCGCTTTCATTCGGGCGTA
CGAAGTATTGCATCCTTTATGTTTATTCTGGATGAGATTCTGTTTCTGCC
TTTCATTGTGTATGTACCAGCTATAGCTCTGAATCATGCATCGGGCATTA
ATCTACATGTGATTGCAGTGCTAATTGTGCTCGTGTGTGTTTTCTACACC
TTTGTCAGAGGGAACAACCAGTGGTCCACACTCATGCTTGGCAGGTGCTG
GTCATGTGCCTTTCCGTTCTTGCTGTGGCTATTTTTGGCCACTGTCTATG
CAAATGGCTTGAATGTCCTTTTTCGATGATGCTGCCAAAGGTGGCCGATT
GATCTTTAACAATACAAACCCCTTCGCCTTATGAAGGCACCCTGTTTGGA
GCGTCTTATCTGGGGATCCTCCTACTGGACCTCATTCCATGCCGTCAACC
AGACTATGGTCCAGCGATACGTCTCTCTTCCCATCCCTCAGAAGAGCTAG
TGCTTCCATGAGCCATTTTTACCGATTGGCGAGGCTGACCTTCCACCCCT
TGTTGGTGTTATGGAGGAACTGCTAGTCTATTGACATGTCCAAGATTGCT
GAATCCTCTGAGTTGCGGGACTAATGAACAACTGACGAACCAGCTAACTG
CCACTCCTTTGGTCCTTCAAGAGAGTGGATCTATTCTTTGGTTATGTCCT
GGGTTTGTCTTATATTAGGGCATATATGGGAGCCCTCCCTCGAAATCCCC
CATTTTGGTGATCTGAACTTCACAGGTCCTTGTGGAGTCCGGGGAGAGAA
TAATACCTTCCTCGGCAGATCGTGCTCCTCTCAGT
FMO03067.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 19:11:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SLC5A11-RA | 2660 | CG8451-RA | 438..1547 | 36..1164 | 3910 | 91.5 | Plus |
| CG31668-RC | 1963 | CG31668-RC | 304..566 | 231..493 | 400 | 76.8 | Plus |
| CG33124-RD | 2094 | CG33124-RD | 353..616 | 228..491 | 330 | 75.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 19:11:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8201862..8202162 | 972..669 | 910 | 91.8 | Minus |
| 2L | 23513712 | 2L | 8203088..8203250 | 469..307 | 695 | 95.1 | Minus |
| 2L | 23513712 | 2L | 8203314..8203463 | 310..161 | 660 | 96 | Minus |
| 2L | 23513712 | 2L | 8203526..8203637 | 155..44 | 515 | 97.3 | Minus |
| 2L | 23513712 | 2L | 8202468..8202533 | 536..471 | 315 | 98.5 | Minus |
| 2L | 23513712 | 2L | 8202232..8202298 | 656..590 | 290 | 95.5 | Minus |
| 2L | 23513712 | 2L | 8202360..8202411 | 586..535 | 260 | 100 | Minus |
| 2L | 23513712 | 2L | 2208611..2208690 | 307..228 | 205 | 83.8 | Minus |
| 2L | 23513712 | 2L | 2205491..2205612 | 466..345 | 190 | 77 | Minus |
Blast to na_te.dros performed on 2014-11-28 19:11:11 has no hits.
FMO03067.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.5.fasta performed on 2008-07-09 15:05:01 has no hits.
Sim4 to dmel-all-transcript-r5.52.fasta performed on 2013-08-04 22:15:23 has no hits.
Sim4 to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 19:50:19 has no hits.
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 19:50:19 Download gff for
FMO03067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8201888..8202175 | 657..944 | 91 | <- | Minus |
| 2L | 8202232..8202299 | 589..656 | 94 | <- | Minus |
| 2L | 8202358..8202409 | 537..588 | 98 | <- | Minus |
| 2L | 8202468..8202533 | 471..536 | 98 | <- | Minus |
| 2L | 8203087..8203246 | 311..470 | 94 | <- | Minus |
| 2L | 8203314..8203469 | 155..310 | 94 | <- | Minus |
| 2L | 8203527..8203636 | 45..154 | 97 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:15:23 Download gff for
FMO03067.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8201888..8202175 | 657..944 | 91 | <- | Minus |
| arm_2L | 8202232..8202299 | 589..656 | 94 | <- | Minus |
| arm_2L | 8202358..8202409 | 537..588 | 98 | <- | Minus |
| arm_2L | 8202468..8202533 | 471..536 | 98 | <- | Minus |
| arm_2L | 8203087..8203246 | 311..470 | 94 | <- | Minus |
| arm_2L | 8203314..8203469 | 155..310 | 94 | <- | Minus |
| arm_2L | 8203527..8203636 | 45..154 | 97 | <- | Minus |
